RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 PLCXD1Q9NUJ7 323 aa13.53□□□□□ -0.24
CLK3-210ENST00000563112 IDI2-AS1Q9NZ38 188 aa13.53□□□□□ -0.24
CLK3-210ENST00000563112 PSORS1C1Q9UIG5 152 aa13.53□□□□□ -0.24
CLK3-210ENST00000563112 AMMECR1Q9Y4X0 333 aaPredicted RBP13.53□□□□□ -0.24
CLK3-210ENST00000563112 XPNPEP2O43895 674 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 FBXO24O75426 580 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 IL1AP01583 271 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 GNAO1P09471 354 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 CGB3P0DN86 165 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 CGB7P0DN87 165 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 GTF2F2P13984 249 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 SERPINA2P20848 420 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 VDAC2P45880 294 aaPredicted RBP13.52□□□□□ -0.25
CLK3-210ENST00000563112 RBM11P57052 281 aaKnown RBP13.52□□□□□ -0.25
CLK3-210ENST00000563112 BLCAPP62952 87 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 TPTE2P1Q5T6R2 138 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 AHSA2Q719I0 299 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 ZNF485Q8NCK3 441 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 PLPPR1Q8TBJ4 325 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 MRGPRDQ8TDS7 321 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 KIRREL1Q96J84 757 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 PGLYRP3Q96LB9 341 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 MMP28Q9H239 520 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 IFT22Q9H7X7 185 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 LIN7BQ9HAP6 207 aa13.52□□□□□ -0.25
CLK3-210ENST00000563112 PNMA8CA0A1B0GUJ8 204 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 GEMIN2O14893 280 aaKnown RBP13.51□□□□□ -0.25
CLK3-210ENST00000563112 FSTP19883 344 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 GZMHP20718 246 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 WNT4P56705 351 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 RPS11P62280 158 aaKnown RBP eCLIP13.51□□□□□ -0.25
CLK3-210ENST00000563112 EMX1Q04741 257 aaPredicted RBP13.51□□□□□ -0.25
CLK3-210ENST00000563112 MPV17LQ2QL34 196 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 SLC22A6Q4U2R8 563 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 ATAD3CQ5T2N8 411 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 JAGN1Q8N5M9 183 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 OR10A7Q8NGE5 316 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 NEK7Q8TDX7 302 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 THRSPQ92748 146 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 RPEQ96AT9 228 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 OR14A2Q96R54 314 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 OR5M11Q96RB7 305 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 DCLRE1BQ9H816 532 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 LINC00574Q9H8X3 128 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 ERGIC3Q9Y282 383 aa13.51□□□□□ -0.25
CLK3-210ENST00000563112 TRBV5-7A0A0A0MS05 114 aa13.5□□□□□ -0.25
CLK3-210ENST00000563112 A0A1W2PPK0 400 aa13.5□□□□□ -0.25
CLK3-210ENST00000563112 TMEM30CPA0ZSE6 113 aa13.5□□□□□ -0.25
CLK3-210ENST00000563112 J3QR06 171 aa13.5□□□□□ -0.25
CLK3-210ENST00000563112 CD1AP06126 327 aa13.5□□□□□ -0.25
CLK3-210ENST00000563112 CELP19835 753 aa13.5□□□□□ -0.25
CLK3-210ENST00000563112 CD24P25063 80 aa13.5□□□□□ -0.25
CLK3-210ENST00000563112 LTC4SQ16873 150 aa13.5□□□□□ -0.25
CLK3-210ENST00000563112 PDLIM3Q53GG5 364 aaPredicted RBP13.5□□□□□ -0.25
CLK3-210ENST00000563112 SLC16A12Q6ZSM3 486 aa13.5□□□□□ -0.25
CLK3-210ENST00000563112 CDH26Q8IXH8 852 aa13.5□□□□□ -0.25
CLK3-210ENST00000563112 RFESDQ8TAC1 157 aa13.5□□□□□ -0.25
CLK3-210ENST00000563112 FBLIM1Q8WUP2 373 aa13.5□□□□□ -0.25
CLK3-210ENST00000563112 TOMM40LQ969M1 308 aa13.5□□□□□ -0.25
CLK3-210ENST00000563112 SLC25A33Q9BSK2 321 aa13.5□□□□□ -0.25
CLK3-210ENST00000563112 SPACA1Q9HBV2 294 aa13.5□□□□□ -0.25
CLK3-210ENST00000563112 MRPS28Q9Y2Q9 187 aaKnown RBP13.5□□□□□ -0.25
CLK3-210ENST00000563112 TRAV8-7A0A075B6U6 113 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 NPIPB11E5RHQ5 1161 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 ANKRD65E5RJM6 399 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 LY6LH3BQJ8 138 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 OR2F2O95006 317 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 MAS1P04201 325 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 FAM106CPP0CH98 169 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 MAPK3P27361 379 aaPredicted RBP13.49□□□□□ -0.25
CLK3-210ENST00000563112 NSUN5P1Q3KNT7 163 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 LAIR2Q6ISS4 152 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 GLIPR1L1Q6UWM5 242 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 NANOGP1Q8N7R0 232 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 TFAP2CQ92754 450 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 MUL1Q969V5 352 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 MRPS24Q96EL2 167 aaKnown RBP13.49□□□□□ -0.25
CLK3-210ENST00000563112 RBM14Q96PK6 669 aaKnown RBP13.49□□□□□ -0.25
CLK3-210ENST00000563112 WNT10AQ9GZT5 417 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 PSG11Q9UQ72 335 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 TGP01266 2768 aa13.49□□□□□ -0.25
CLK3-210ENST00000563112 M0QZK8 103 aa13.48□□□□□ -0.25
CLK3-210ENST00000563112 IGHV3-7P01780 117 aa13.48□□□□□ -0.25
CLK3-210ENST00000563112 CD28P10747 220 aa13.48□□□□□ -0.25
CLK3-210ENST00000563112 MADCAM1Q13477 382 aa13.48□□□□□ -0.25
CLK3-210ENST00000563112 DOC2BQ14184 412 aa13.48□□□□□ -0.25
CLK3-210ENST00000563112 HIST2H2BDQ6DRA6 164 aa13.48□□□□□ -0.25
CLK3-210ENST00000563112 AWAT2Q6E213 333 aa13.48□□□□□ -0.25
CLK3-210ENST00000563112 Q6ZS46 218 aa13.48□□□□□ -0.25
CLK3-210ENST00000563112 LEAP2Q969E1 77 aa13.48□□□□□ -0.25
CLK3-210ENST00000563112 DERL3Q96Q80 235 aa13.48□□□□□ -0.25
CLK3-210ENST00000563112 SCN3BQ9NY72 215 aa13.48□□□□□ -0.25
CLK3-210ENST00000563112 TRAV39A0A0B4J263 110 aa13.47□□□□□ -0.25
CLK3-210ENST00000563112 A0A1W2PP11 408 aa13.47□□□□□ -0.25
CLK3-210ENST00000563112 MAGEA13PA6NCF6 341 aa13.47□□□□□ -0.25
CLK3-210ENST00000563112 MCRIP1C9JLW8 97 aa13.47□□□□□ -0.25
CLK3-210ENST00000563112 OPN1MWP04001 364 aa13.47□□□□□ -0.25
CLK3-210ENST00000563112 OPN1MW2P0DN77 364 aa13.47□□□□□ -0.25
CLK3-210ENST00000563112 OPN1MW3P0DN78 364 aa13.47□□□□□ -0.25
CLK3-210ENST00000563112 SSTR5P35346 364 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms