RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 MPZL1O95297 269 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 HPNP05981 417 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 TNFSF4P23510 183 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 TMEM187Q14656 261 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 ADAT3Q96EY9 351 aaPredicted RBP16.16■□□□□ 0.18
RAB40C-206ENST00000561781 R4GN57 208 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 TRPM6Q9BX84 2022 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 IGHV1OR15-9A0A0B4J2B8 117 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 HRKO00198 91 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 ADH1BP00325 375 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 CTLA4P16410 223 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 Q6ZN92 141 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 LYZL2Q7Z4W2 148 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 ZNF709Q8N972 641 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 TM4SF19Q96DZ7 209 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 ARHGAP5-AS1Q96IT6 56 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 SPACA7Q96KW9 195 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 BANF2Q9H503 90 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 ZNF430Q9H8G1 570 aaPredicted RBP16.15■□□□□ 0.18
RAB40C-206ENST00000561781 IL19Q9UHD0 177 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 RNF24Q9Y225 148 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 TRAPPC1Q9Y5R8 145 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 PRSS37A4D1T9 235 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 IGLON5A6NGN9 336 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 K7ERU9 68 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 JMJD7P0C870 316 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 CD33P20138 364 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 BLKP51451 505 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 ZNF787Q6DD87 383 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 UNQ5815/PRO19632Q6UWF5 114 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 THAP3Q8WTV1 239 aaPredicted RBP16.15■□□□□ 0.18
RAB40C-206ENST00000561781 TMEM171Q8WVE6 324 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 ZNF524Q96C55 264 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 OR2A5Q96R48 311 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 TMEM59Q9BXS4 323 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 MANBALQ9NQG1 85 aa16.15■□□□□ 0.18
RAB40C-206ENST00000561781 IGLV1-36A0A0B4J1U3 117 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 IGSF23A1L1A6 192 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 BGLAPP02818 100 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 ZNF93P35789 620 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-206ENST00000561781 CTRLP40313 264 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 ARF6P62330 175 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 SUMO1P63165 101 aaKnown RBP16.14■□□□□ 0.17
RAB40C-206ENST00000561781 CLEC12BQ2HXU8 276 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 C18orf12Q96KH6 178 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 NAA60Q9H7X0 242 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 LYRM4Q9HD34 91 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 DECR2Q9NUI1 292 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 PILRAQ9UKJ1 303 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 A0A1W2PP11 408 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 IFNA1P01562 189 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 FREM3P0C091 2139 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 SP9P0CG40 484 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 GCH1P30793 250 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 MPLP40238 635 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 RPL15P61313 204 aaKnown RBP16.14■□□□□ 0.17
RAB40C-206ENST00000561781 RPL23P62829 140 aaKnown RBP16.14■□□□□ 0.17
RAB40C-206ENST00000561781 GLIPR1L1Q6UWM5 242 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 OR5C1Q8NGR4 320 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 DDIT4LQ96D03 193 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 ZNF665Q9H7R5 613 aa16.14■□□□□ 0.17
RAB40C-206ENST00000561781 MBNL1Q9NR56 388 aaKnown RBP16.14■□□□□ 0.17
RAB40C-206ENST00000561781 ZNF320A2RRD8 509 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 CDS2O95674 445 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 ZNF10P21506 573 aaPredicted RBP16.13■□□□□ 0.17
RAB40C-206ENST00000561781 CDKN1AP38936 164 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 PIGPP57054 158 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 CBLN3Q6UW01 205 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 MRGPRGQ86SM5 289 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 OR4D5Q8NGN0 318 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 VSTM2LQ96N03 204 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 HSPB9Q9BQS6 159 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 PXMP4Q9Y6I8 212 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 SPACA6W5XKT8 324 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 KBTBD11O94819 623 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 ESDP10768 282 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 TAS2R30P59541 319 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 SPATA45Q537H7 98 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 LIAT1Q6ZQX7 453 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 OR5AU1Q8NGC0 362 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 OR5D14Q8NGL3 314 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 GPR146Q96CH1 333 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 REEP6Q96HR9 211 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 C11orf1Q9H5F2 150 aa16.13■□□□□ 0.17
RAB40C-206ENST00000561781 CEBPZOSA8MTT3 80 aa16.12■□□□□ 0.17
RAB40C-206ENST00000561781 CTSBP07858 339 aa16.12■□□□□ 0.17
RAB40C-206ENST00000561781 RUNX1Q01196 453 aa16.12■□□□□ 0.17
RAB40C-206ENST00000561781 OR2V1Q8NHB1 315 aa16.12■□□□□ 0.17
RAB40C-206ENST00000561781 WDYHV1Q96HA8 205 aa16.12■□□□□ 0.17
RAB40C-206ENST00000561781 LOXL4Q96JB6 756 aa16.12■□□□□ 0.17
RAB40C-206ENST00000561781 MRPS28Q9Y2Q9 187 aaKnown RBP16.12■□□□□ 0.17
RAB40C-206ENST00000561781 ZFHX2Q9C0A1 2572 aaPredicted RBP16.12■□□□□ 0.17
RAB40C-206ENST00000561781 OR6C6A6NF89 314 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 ZNF878C9JN71 531 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 IGLC2P0DOY2 106 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 IGLC3P0DOY3 106 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 OMGP23515 440 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 RHOGP84095 191 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 CD226Q15762 336 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms