RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 TRIM61Q5EBN2 209 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 TMEM42Q69YG0 159 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 LYZL2Q7Z4W2 148 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 PPP1R32Q7Z5V6 425 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 ABHD3Q8WU67 409 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 SLC2A9Q9NRM0 540 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 STARD10Q9Y365 291 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 POMT1Q9Y6A1 747 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 LRRC3CA6NJW4 275 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 C1QL1O75973 258 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 CER1O95813 267 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 IGHEP01854 428 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 MBPP02686 304 aaPredicted RBP9.47□□□□□ -0.89
NEIL1-202ENST00000561643 GAPDHP04406 335 aaKnown RBP9.47□□□□□ -0.89
NEIL1-202ENST00000561643 TCN2P20062 427 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 NKX6-1P78426 367 aaPredicted RBP9.47□□□□□ -0.89
NEIL1-202ENST00000561643 Q0VFX4 171 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 ASCL4Q6XD76 172 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 WDR5BQ86VZ2 330 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 GALNT14Q96FL9 552 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 ZNF845Q96IR2 970 aaPredicted RBP9.47□□□□□ -0.89
NEIL1-202ENST00000561643 PLEKHA2Q9HB19 425 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 GPR35Q9HC97 309 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 ZNF816-ZNF321PA0A0X1KG74 233 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 E5RGE8 158 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 XRCC2O43543 280 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 PDCD6O75340 191 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 OR7C1O76099 320 aaPredicted RBP9.46□□□□□ -0.89
NEIL1-202ENST00000561643 HERV-K104P61576 105 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 C4orf17Q53FE4 359 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 RIF1Q5UIP0 2472 aaKnown RBP9.46□□□□□ -0.89
NEIL1-202ENST00000561643 ABLIM2Q6H8Q1 611 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 UBALD2Q8IYN6 164 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 ERGIC1Q969X5 290 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 SYT3Q9BQG1 590 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 TCFL5Q9UL49 500 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 NSG2Q9Y328 171 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 KIAA1549Q9HCM3 1950 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 TRGC2P03986 189 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 RIPPLY2Q5TAB7 128 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 OR11L1Q8NGX0 322 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 Q8WTZ3 238 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 YPEL4Q96NS1 127 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 SCRT1Q9BWW7 348 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 DEPPQ9NTK1 212 aa9.46□□□□□ -0.89
NEIL1-202ENST00000561643 CCNOP22674 350 aa9.46□□□□□ -0.9
NEIL1-202ENST00000561643 IL2RGP31785 369 aa9.46□□□□□ -0.9
NEIL1-202ENST00000561643 CYB561P49447 251 aa9.46□□□□□ -0.9
NEIL1-202ENST00000561643 CLDN15P56746 228 aa9.46□□□□□ -0.9
NEIL1-202ENST00000561643 FOXO1Q12778 655 aa9.46□□□□□ -0.9
NEIL1-202ENST00000561643 LBHQ53QV2 105 aaPredicted RBP9.46□□□□□ -0.9
NEIL1-202ENST00000561643 DCAF12Q5T6F0 453 aa9.46□□□□□ -0.9
NEIL1-202ENST00000561643 OR2T2Q6IF00 324 aa9.46□□□□□ -0.9
NEIL1-202ENST00000561643 LIAT1Q6ZQX7 453 aa9.46□□□□□ -0.9
NEIL1-202ENST00000561643 SLC25A26Q70HW3 274 aa9.46□□□□□ -0.9
NEIL1-202ENST00000561643 ZNF100Q8IYN0 542 aa9.46□□□□□ -0.9
NEIL1-202ENST00000561643 MUCL1Q96DR8 90 aa9.46□□□□□ -0.9
NEIL1-202ENST00000561643 ADGRG7Q96K78 797 aa9.46□□□□□ -0.9
NEIL1-202ENST00000561643 ZPBPQ9BS86 351 aa9.46□□□□□ -0.9
NEIL1-202ENST00000561643 FRYLO94915 3013 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 TGIF2-C20orf24A0A0A6YYL0 155 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 PHF1O43189 567 aaPredicted RBP9.45□□□□□ -0.9
NEIL1-202ENST00000561643 APLNRP35414 380 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 RBM11P57052 281 aaKnown RBP9.45□□□□□ -0.9
NEIL1-202ENST00000561643 NHLH2Q02577 135 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 KRTAP27-1Q3LI81 207 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 AKR1C8PQ5T2L2 129 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 FBXW12Q6X9E4 464 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 CALHM1Q8IU99 346 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 LGI3Q8N145 548 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 ZNF611Q8N823 705 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 PACRGQ96M98 296 aaPredicted RBP9.45□□□□□ -0.9
NEIL1-202ENST00000561643 OR51B6Q9H340 312 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 FUT3P21217 361 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 OR8B8Q15620 311 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 C9orf135Q5VTT2 229 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 MEX3BQ6ZN04 569 aaKnown RBP9.45□□□□□ -0.9
NEIL1-202ENST00000561643 THNSL2Q86YJ6 484 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 MOB3AQ96BX8 217 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 P4HTMQ9NXG6 502 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 IL36GQ9NZH8 169 aa9.45□□□□□ -0.9
NEIL1-202ENST00000561643 BORCS7-ASMTA0A0B4J1R7 106 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 ZNF705GA8MUZ8 300 aaPredicted RBP9.44□□□□□ -0.9
NEIL1-202ENST00000561643 A8MWP6 167 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 CYB5BO43169 146 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 LAMTOR5O43504 91 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 AADACP22760 399 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 DUSP1P28562 367 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 CD200P41217 278 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 CAMLGP49069 296 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 RAB1AP62820 205 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 SRYQ05066 204 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 RNF151Q2KHN1 245 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 CCDC71LQ8N9Z2 235 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 TMEM208Q9BTX3 173 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 SLC35B3Q9H1N7 401 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 SHANK1Q9Y566 2161 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 PINLYPA6NC86 204 aa9.44□□□□□ -0.9
NEIL1-202ENST00000561643 MRPL33O75394 65 aaKnown RBP9.44□□□□□ -0.9
NEIL1-202ENST00000561643 PRH1P02810 166 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms