RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 CFHR2P36980 270 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 GATA4P43694 442 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 ARPC4P59998 168 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 RRAS2P62070 204 aaPredicted RBP6.32□□□□□ -1.4
TPM1-231ENST00000561395 CDK10Q15131 360 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 SRSF7Q16629 238 aaKnown RBP eCLIP6.32□□□□□ -1.4
TPM1-231ENST00000561395 SMIM21Q3B7S5 101 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 CHRFAM7AQ494W8 412 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 BEX5Q5H9J7 111 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 ATPAF1Q5TC12 328 aaPredicted RBP6.32□□□□□ -1.4
TPM1-231ENST00000561395 METTL11BQ5VVY1 283 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 GLDNQ6ZMI3 551 aaPredicted RBP6.32□□□□□ -1.4
TPM1-231ENST00000561395 ACP7Q6ZNF0 438 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 Q6ZPA2 131 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 Q6ZS49 121 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 OVCH2Q7RTZ1 564 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 SLC36A1Q7Z2H8 476 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 ZDHHC22Q8N966 263 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 OR10Z1Q8NGY1 313 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 OR6F1Q8NGZ6 308 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 LINC01560Q8TB33 94 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 ITLN1Q8WWA0 313 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 TMEM158Q8WZ71 300 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 MRGPRFQ96AM1 343 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 MED30Q96HR3 178 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 DPCDQ9BVM2 203 aaPredicted RBP6.32□□□□□ -1.4
TPM1-231ENST00000561395 BEX2Q9BXY8 128 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 PPA2Q9H2U2 334 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 OR51J1Q9H342 316 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 PLEKHF2Q9H8W4 249 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 FN3KRPQ9HA64 309 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 BEX1Q9HBH7 125 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 ZNF286AQ9HBT8 521 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 CHMP1AQ9HD42 196 aaPredicted RBP6.32□□□□□ -1.4
TPM1-231ENST00000561395 RASL12Q9NYN1 266 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 EHFQ9NZC4 300 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 ANXA10Q9UJ72 324 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 ZDHHC8Q9ULC8 765 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 VSIG4Q9Y279 399 aa6.32□□□□□ -1.4
TPM1-231ENST00000561395 TRBV6-6A0A0A6YYG2 114 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 CEACAM18A8MTB9 384 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 SNRPGP15A8MWD9 76 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 E7EQL1 145 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 SIRPB1O00241 398 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 SLC33A1O00400 549 aaPredicted RBP6.31□□□□□ -1.4
TPM1-231ENST00000561395 HSPB6O14558 160 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 HS3ST1O14792 307 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 SH2D1BO14796 132 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 OR2H2O95918 312 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 HAND1O96004 215 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 HPXP02790 462 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 RLN1P04808 185 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 CD3EP07766 207 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 CD55P08174 381 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 VSIG10L2P0DP72 767 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 ZNF44P15621 663 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 GLRA1P23415 457 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 LOXP28300 417 aaPredicted RBP6.31□□□□□ -1.4
TPM1-231ENST00000561395 MDH2P40926 338 aaKnown RBP6.31□□□□□ -1.4
TPM1-231ENST00000561395 OR3A3P47888 321 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 GMFBP60983 142 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 TNFAIP6P98066 277 aaPredicted RBP6.31□□□□□ -1.4
TPM1-231ENST00000561395 CBX3Q13185 183 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 RBM39Q14498 530 aaKnown RBP6.31□□□□□ -1.4
TPM1-231ENST00000561395 GRK1Q15835 563 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 PAN3Q58A45 887 aaKnown RBP6.31□□□□□ -1.4
TPM1-231ENST00000561395 SPRNQ5BIV9 151 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 CD276Q5ZPR3 534 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 ZNF880Q6PDB4 577 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 MOGAT3Q86VF5 341 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 LHFPL1Q86WI0 220 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 TMEM17Q86X19 198 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 FAM90A1Q86YD7 464 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 TERB2Q8NHR7 220 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 NEK7Q8TDX7 302 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 LRRC29Q8WV35 223 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 CCDC107Q8WV48 283 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 RDH5Q92781 318 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 ST6GAL2Q96JF0 529 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 DIRC2Q96SL1 478 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 SEC22CQ9BRL7 303 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 ALX4Q9H161 411 aaPredicted RBP6.31□□□□□ -1.4
TPM1-231ENST00000561395 WDR13Q9H1Z4 485 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 MED28Q9H204 178 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 RIMS4Q9H426 269 aaPredicted RBP6.31□□□□□ -1.4
TPM1-231ENST00000561395 Q9N2K0 584 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 MYOZ1Q9NP98 299 aaPredicted RBP6.31□□□□□ -1.4
TPM1-231ENST00000561395 NECAP2Q9NVZ3 263 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 ETAA1Q9NY74 926 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 TREM2Q9NZC2 230 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 IL19Q9UHD0 177 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 GLS2Q9UI32 602 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 ZNF221Q9UK13 617 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 TMA7Q9Y2S6 64 aaKnown RBP6.31□□□□□ -1.4
TPM1-231ENST00000561395 RNF115Q9Y4L5 304 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 TANC2Q9HCD6 1990 aa6.31□□□□□ -1.4
TPM1-231ENST00000561395 ANK3Q12955 4377 aaKnown RBP6.31□□□□□ -1.4
TPM1-231ENST00000561395 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.3□□□□□ -1.45e-6■■■□□ 16.3
TPM1-231ENST00000561395 C17orf100A8MU93 164 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 A8MV72 311 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms