RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, human

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-208	ENST00000561271	FBXO24	O75426	580 aa		13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	OR7C1	O76099	320 aa	Predicted RBP	13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	IL1A	P01583	271 aa		13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	CSTB	P04080	98 aa	Known RBP	13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	CGB3	P0DN86	165 aa		13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	CGB7	P0DN87	165 aa		13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	CD28	P10747	220 aa		13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	FST	P19883	344 aa		13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	SSTR5	P35346	364 aa		13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	SLC22A6	Q4U2R8	563 aa		13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	TPTE2P1	Q5T6R2	138 aa		13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	OSR2	Q8N2R0	312 aa		13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	S100A13	Q99584	98 aa		13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	BARHL1	Q9BZE3	327 aa		13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	CNOT2	Q9NZN8	540 aa	Known RBP	13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	CKLF	Q9UBR5	152 aa		13.78	□□□□□ -0.2
CDC42BPB-208	ENST00000561271	PEX14	O75381	377 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	C21orf33	P30042	268 aa	Predicted RBP	13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	BRS3	P32247	399 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	CEACAM3	P40198	252 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	VDAC2	P45880	294 aa	Predicted RBP	13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	KCNJ3	P48549	501 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	ARHGDIB	P52566	201 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	PAX5	Q02548	391 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	NHLRC3	Q5JS37	347 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	STX19	Q8N4C7	294 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	BPIFB6	Q8NFQ5	453 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	OR9G1	Q8NH87	305 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	RFESD	Q8TAC1	157 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	FBLIM1	Q8WUP2	373 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	SLC25A33	Q9BSK2	321 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	MMP28	Q9H239	520 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	IDI2-AS1	Q9NZ38	188 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	PSORS1C1	Q9UIG5	152 aa		13.77	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	TRBV5-7	A0A0A0MS05	114 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	LY6L	H3BQJ8	138 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	GNG10	P50151	68 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	PRRX1	P54821	245 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	WNT4	P56705	351 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	TAS2R43	P59537	309 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	NSUN5P1	Q3KNT7	163 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	JAGN1	Q8N5M9	183 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	ZNF565	Q8N9K5	539 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	WIPF2	Q8TF74	440 aa	Predicted RBP	13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	TOMM40L	Q969M1	308 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	MUL1	Q969V5	352 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	CREB3L1	Q96BA8	519 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	WNT10A	Q9GZT5	417 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	NCOR1P1	Q9H4R4	102 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	IFT22	Q9H7X7	185 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	LIN7B	Q9HAP6	207 aa		13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.76	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	SH2D7	A6NKC9	451 aa	Predicted RBP	13.75	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	GPX5	O75715	221 aa		13.75	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	CEL	P19835	753 aa		13.75	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	MPV17L	Q2QL34	196 aa		13.75	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	ATAD3C	Q5T2N8	411 aa		13.75	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	C16orf82	Q7Z2V1	217 aa		13.75	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	LINC00596	Q86U02	117 aa		13.75	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	NEK7	Q8TDX7	302 aa		13.75	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	RPE	Q96AT9	228 aa		13.75	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	DERL3	Q96Q80	235 aa		13.75	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	CITED2	Q99967	270 aa	Predicted RBP	13.75	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	VCX	Q9H320	206 aa		13.75	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	PLCXD1	Q9NUJ7	323 aa		13.75	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	MRPS28	Q9Y2Q9	187 aa	Known RBP	13.75	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.75	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	TMEM30CP	A0ZSE6	113 aa		13.74	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	NPIPB11	E5RHQ5	1161 aa		13.74	□□□□□ -0.21
CDC42BPB-208	ENST00000561271		J3QR06	171 aa		13.74	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	MAS1	P04201	325 aa		13.74	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	GTF2F2	P13984	249 aa		13.74	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	ABCA11P	Q4W5N1	156 aa		13.74	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	CCDC144NL	Q6NUI1	221 aa		13.74	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	UBALD1	Q8TB05	177 aa		13.74	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	CAPSL	Q8WWF8	208 aa		13.74	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	AKR1E2	Q96JD6	320 aa		13.74	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	LINC00574	Q9H8X3	128 aa		13.74	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	FKBP14	Q9NWM8	211 aa		13.74	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.74	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	PSG11	Q9UQ72	335 aa		13.74	□□□□□ -0.21
CDC42BPB-208	ENST00000561271		A0A1W2PPE3	182 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271		A0A1W2PPI3	338 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	ADARB2-AS1	A8MUL3	147 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	OOSP1	A8MZH6	123 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271		H3BUI4	141 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	PIN1P1	O15428	100 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	ZNF780A	O75290	641 aa	Predicted RBP	13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	OR2F2	O95006	317 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	OPN1MW	P04001	364 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	OPN1MW2	P0DN77	364 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	OPN1MW3	P0DN78	364 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	MNDA	P41218	407 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	DIAPH2-AS1	Q14236	149 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	AWAT2	Q6E213	333 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	GLIPR1L1	Q6UWM5	242 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	NANOGP1	Q8N7R0	232 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	OR56B4	Q8NH76	319 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	CCDC107	Q8WV48	283 aa		13.73	□□□□□ -0.21

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