RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 POGZQ7Z3K3 1410 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 YEATS2Q9ULM3 1422 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 MYH15Q9Y2K3 1946 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 PTPRMP28827 1452 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 WDR97A6NE52 1622 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 IGHV2-26A0A0B4J1V2 119 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 IGHV3-35A0A0C4DH35 117 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 NDUFAF8A1L188 74 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 EFCAB10A6NFE3 127 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ARL5CA6NH57 179 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 OR4C46A6NHA9 309 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 OR11H12B2RN74 326 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ZNF878C9JN71 531 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 F5H5P2 479 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 INS-IGF2F8WCM5 200 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 M0QZK8 103 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 AIPO00170 330 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 SLC17A3O00476 420 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 HMGB3O15347 200 aaKnown RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 SPAG7O75391 227 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 CA11O75493 328 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 STK16O75716 305 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 SUPT7LO94864 414 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 NDUFC2O95298 119 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 HAND1O96004 215 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 CA2P00918 260 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 MAS1P04201 325 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 CTSLP07711 333 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 FBP1P09467 338 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 OR5G3P0C626 314 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ZNF688P0C7X2 276 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 RNF224P0DH78 156 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 SCGB1A1P11684 91 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 CBR1P16152 277 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ZNF17P17021 662 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 CAPN2P17655 700 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 CXCL2P19875 107 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 CRABP1P29762 137 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ERP29P30040 261 aaKnown RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 MPIP34949 423 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 HSPA9P38646 679 aaKnown RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 MDH2P40926 338 aaKnown RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 GABRA4P48169 554 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 REG1BP48304 166 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ZNF83P51522 516 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 CRYBA4P53673 196 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 TPI1P60174 286 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ESRRGP62508 458 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 GNG3P63215 75 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 HLA-DRB3P79483 266 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 CDK5Q00535 292 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 FLI1Q01543 452 aaPredicted RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 COL10A1Q03692 680 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 EGFEM1PQ0D2K5 195 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 TMEM267Q0VDI3 215 aaPredicted RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 PMAIP1Q13794 54 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ELOCQ15369 112 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ZNF239Q16600 458 aaKnown RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 TMEM183BQ1AE95 376 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ACOT6Q3I5F7 207 aaPredicted RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 FBXL19-AS1Q494R0 122 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 Q499Y3 187 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ABCA11PQ4W5N1 156 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 MPV17L2Q567V2 206 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 FAM78AQ5JUQ0 283 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 FAM222AQ5U5X8 452 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 SAMD13Q5VXD3 122 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 TEX36Q5VZQ5 186 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 AWAT2Q6E213 333 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ZNF774Q6NX45 483 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 DNAJC24Q6P3W2 148 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 GUSBP11Q6P575 273 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 TBPL2Q6SJ96 375 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 FBXW12Q6X9E4 464 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 TCF23Q7RTU1 214 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ATP5L2Q7Z4Y8 100 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 NR2C2APQ86WQ0 139 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 DHFR2Q86XF0 187 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ZNF575Q86XF7 245 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 PDPNQ86YL7 162 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ZNF584Q8IVC4 421 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 TMEM183AQ8IXX5 376 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ZCCHC24Q8N2G6 241 aaKnown RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 FAM24BQ8N5W8 94 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 ANKRD29Q8N6D5 301 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 C14orf178Q8N769 122 aaPredicted RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 ARIH2OSQ8N7S6 290 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 C11orf72Q8NBR9 251 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 OR11H1Q8NG94 326 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 OR10G2Q8NGC3 310 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 OR11H2Q8NH07 326 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 OR8S1Q8NH09 359 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 OR51H1Q8NH63 302 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 SPPL2BQ8TCT7 592 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 MBD3L1Q8WWY6 194 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 CCL17Q92583 94 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 PTX4Q96A99 478 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 EXOSC8Q96B26 276 aaKnown RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 ZNF501Q96CX3 271 aaPredicted RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 RMND5BQ96G75 393 aaPredicted RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms