RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 C10orf99Q6UWK7 81 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 PQLC1Q8N2U9 271 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 OR4X2Q8NGF9 303 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 OR10K1Q8NGX5 313 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 LEAP2Q969E1 77 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 TOMM40LQ969M1 308 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 FAM192AQ9GZU8 254 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 FGF20Q9NP95 211 aaPredicted RBP12.9□□□□□ -0.34
SNX1-213ENST00000561026 AURKAIP1Q9NWT8 199 aaPredicted RBP12.9□□□□□ -0.34
SNX1-213ENST00000561026 IDI2-AS1Q9NZ38 188 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 PSG11Q9UQ72 335 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 WBP4O75554 376 aaKnown RBP12.89□□□□□ -0.35
SNX1-213ENST00000561026 CD2P06729 351 aa12.89□□□□□ -0.35
SNX1-213ENST00000561026 MADCAM1Q13477 382 aa12.89□□□□□ -0.35
SNX1-213ENST00000561026 SMN1Q16637 294 aaKnown RBP12.89□□□□□ -0.35
SNX1-213ENST00000561026 OR56B4Q8NH76 319 aa12.89□□□□□ -0.35
SNX1-213ENST00000561026 RFESDQ8TAC1 157 aa12.89□□□□□ -0.35
SNX1-213ENST00000561026 PLPPR1Q8TBJ4 325 aa12.89□□□□□ -0.35
SNX1-213ENST00000561026 MRGPRDQ8TDS7 321 aa12.89□□□□□ -0.35
SNX1-213ENST00000561026 TMEM106AQ96A25 262 aa12.89□□□□□ -0.35
SNX1-213ENST00000561026 TMEM138Q9NPI0 162 aa12.89□□□□□ -0.35
SNX1-213ENST00000561026 MOB4Q9Y3A3 225 aa12.89□□□□□ -0.35
SNX1-213ENST00000561026 HSPE1-MOB4S4R3N1 261 aa12.89□□□□□ -0.35
SNX1-213ENST00000561026 CDRT1O95170 752 aa12.88□□□□□ -0.35
SNX1-213ENST00000561026 HTR3BO95264 441 aa12.88□□□□□ -0.35
SNX1-213ENST00000561026 SNRNP70P08621 437 aaKnown RBP12.88□□□□□ -0.35
SNX1-213ENST00000561026 DCKP27707 260 aa12.88□□□□□ -0.35
SNX1-213ENST00000561026 ETV1P50549 477 aa12.88□□□□□ -0.35
SNX1-213ENST00000561026 LTC4SQ16873 150 aa12.88□□□□□ -0.35
SNX1-213ENST00000561026 C9orf152Q5JTZ5 239 aa12.88□□□□□ -0.35
SNX1-213ENST00000561026 SLC16A12Q6ZSM3 486 aa12.88□□□□□ -0.35
SNX1-213ENST00000561026 OSR2Q8N2R0 312 aa12.88□□□□□ -0.35
SNX1-213ENST00000561026 DRAM1Q8N682 238 aa12.88□□□□□ -0.35
SNX1-213ENST00000561026 SUMF2Q8NBJ7 301 aa12.88□□□□□ -0.35
SNX1-213ENST00000561026 OR10A7Q8NGE5 316 aa12.88□□□□□ -0.35
SNX1-213ENST00000561026 DPCDQ9BVM2 203 aaPredicted RBP12.88□□□□□ -0.35
SNX1-213ENST00000561026 IFT22Q9H7X7 185 aa12.88□□□□□ -0.35
SNX1-213ENST00000561026 IL36GQ9NZH8 169 aa12.88□□□□□ -0.35
SNX1-213ENST00000561026 ZNF581Q9P0T4 197 aa12.88□□□□□ -0.35
SNX1-213ENST00000561026 ST3GAL6Q9Y274 331 aa12.88□□□□□ -0.35
SNX1-213ENST00000561026 TRAV39A0A0B4J263 110 aa12.87□□□□□ -0.35
SNX1-213ENST00000561026 A0A1W2PPI3 338 aa12.87□□□□□ -0.35
SNX1-213ENST00000561026 PF4P02776 101 aa12.87□□□□□ -0.35
SNX1-213ENST00000561026 SSTR5P35346 364 aa12.87□□□□□ -0.35
SNX1-213ENST00000561026 PPP3R1P63098 170 aa12.87□□□□□ -0.35
SNX1-213ENST00000561026 DIAPH2-AS1Q14236 149 aa12.87□□□□□ -0.35
SNX1-213ENST00000561026 NHLRC3Q5JS37 347 aa12.87□□□□□ -0.35
SNX1-213ENST00000561026 OR2G6Q5TZ20 316 aa12.87□□□□□ -0.35
SNX1-213ENST00000561026 TMPRSS11AQ6ZMR5 421 aa12.87□□□□□ -0.35
SNX1-213ENST00000561026 ZNF555Q8NEP9 628 aa12.87□□□□□ -0.35
SNX1-213ENST00000561026 METTL9Q9H1A3 318 aa12.87□□□□□ -0.35
SNX1-213ENST00000561026 ING4Q9UNL4 249 aa12.87□□□□□ -0.35
SNX1-213ENST00000561026 SIRT4Q9Y6E7 314 aaPredicted RBP12.87□□□□□ -0.35
SNX1-213ENST00000561026 OGG1O15527 345 aa12.86□□□□□ -0.35
SNX1-213ENST00000561026 OR7C1O76099 320 aaPredicted RBP12.86□□□□□ -0.35
SNX1-213ENST00000561026 GZMHP20718 246 aa12.86□□□□□ -0.35
SNX1-213ENST00000561026 ZNF93P35789 620 aaPredicted RBP12.86□□□□□ -0.35
SNX1-213ENST00000561026 GNG10P50151 68 aa12.86□□□□□ -0.35
SNX1-213ENST00000561026 RAB7AP51149 207 aa12.86□□□□□ -0.35
SNX1-213ENST00000561026 RBM11P57052 281 aaKnown RBP12.86□□□□□ -0.35
SNX1-213ENST00000561026 SLC35A2P78381 396 aa12.86□□□□□ -0.35
SNX1-213ENST00000561026 KHDC1LQ5JSQ8 128 aa12.86□□□□□ -0.35
SNX1-213ENST00000561026 OR8H3Q8N146 312 aa12.86□□□□□ -0.35
SNX1-213ENST00000561026 OR52N1Q8NH53 320 aa12.86□□□□□ -0.35
SNX1-213ENST00000561026 RDH12Q96NR8 316 aa12.86□□□□□ -0.35
SNX1-213ENST00000561026 BABAM2Q9NXR7 383 aa12.86□□□□□ -0.35
SNX1-213ENST00000561026 SMPD3Q9NY59 655 aaPredicted RBP12.86□□□□□ -0.35
SNX1-213ENST00000561026 ZNF281Q9Y2X9 895 aa12.86□□□□□ -0.35
SNX1-213ENST00000561026 PSMB11A5LHX3 300 aa12.85□□□□□ -0.35
SNX1-213ENST00000561026 GEMIN2O14893 280 aaKnown RBP12.85□□□□□ -0.35
SNX1-213ENST00000561026 CSTBP04080 98 aaKnown RBP12.85□□□□□ -0.35
SNX1-213ENST00000561026 TMEM11P17152 192 aa12.85□□□□□ -0.35
SNX1-213ENST00000561026 BDKRB2P30411 391 aa12.85□□□□□ -0.35
SNX1-213ENST00000561026 HES1Q14469 280 aa12.85□□□□□ -0.35
SNX1-213ENST00000561026 HNF4GQ14541 408 aa12.85□□□□□ -0.35
SNX1-213ENST00000561026 DDI2Q5TDH0 399 aa12.85□□□□□ -0.35
SNX1-213ENST00000561026 ZNF329Q86UD4 541 aa12.85□□□□□ -0.35
SNX1-213ENST00000561026 C5orf56Q8N8D9 126 aa12.85□□□□□ -0.35
SNX1-213ENST00000561026 OR10X1Q8NGY0 326 aa12.85□□□□□ -0.35
SNX1-213ENST00000561026 SMIM19Q96E16 107 aa12.85□□□□□ -0.35
SNX1-213ENST00000561026 RCC1LQ96I51 464 aaKnown RBP12.85□□□□□ -0.35
SNX1-213ENST00000561026 S100A13Q99584 98 aa12.85□□□□□ -0.35
SNX1-213ENST00000561026 PAK1IP1Q9NWT1 392 aaPredicted RBP12.85□□□□□ -0.35
SNX1-213ENST00000561026 DNAH3Q8TD57 4116 aa12.85□□□□□ -0.35
SNX1-213ENST00000561026 A0A1W2PPE3 182 aa12.84□□□□□ -0.35
SNX1-213ENST00000561026 TMEM30CPA0ZSE6 113 aa12.84□□□□□ -0.35
SNX1-213ENST00000561026 IRGMA1A4Y4 181 aa12.84□□□□□ -0.35
SNX1-213ENST00000561026 FGF16O43320 207 aa12.84□□□□□ -0.35
SNX1-213ENST00000561026 BAG2O95816 211 aa12.84□□□□□ -0.35
SNX1-213ENST00000561026 CLIC3O95833 236 aa12.84□□□□□ -0.35
SNX1-213ENST00000561026 LINC00596Q86U02 117 aa12.84□□□□□ -0.35
SNX1-213ENST00000561026 GHSRQ92847 366 aa12.84□□□□□ -0.35
SNX1-213ENST00000561026 ORAI1Q96D31 301 aa12.84□□□□□ -0.35
SNX1-213ENST00000561026 DIMT1Q9UNQ2 313 aaKnown RBP12.84□□□□□ -0.35
SNX1-213ENST00000561026 C15orf65H3BRN8 121 aa12.83□□□□□ -0.36
SNX1-213ENST00000561026 ZNF780AO75290 641 aaPredicted RBP12.83□□□□□ -0.36
SNX1-213ENST00000561026 DUS4LO95620 317 aaKnown RBP12.83□□□□□ -0.36
SNX1-213ENST00000561026 LALBAP00709 142 aa12.83□□□□□ -0.36
SNX1-213ENST00000561026 IGKV1D-33P01593 117 aa12.83□□□□□ -0.36
SNX1-213ENST00000561026 IGKV1-33P01594 117 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms