RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 NCOR1P1Q9H4R4 102 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 DUSP21Q9H596 190 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 IFT22Q9H7X7 185 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 ISYNA1Q9NPH2 558 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 ACOT13Q9NPJ3 140 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 C1RLQ9NZP8 487 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 MRPS28Q9Y2Q9 187 aaKnown RBP3.56□□□□□ -1.84
SNX1-205ENST00000559339 MMP24Q9Y5R2 645 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 TRBV5-7A0A0A0MS05 114 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 TRAV24A0A0B4J272 114 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 TMEM30CPA0ZSE6 113 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 CLPSL1A2RUU4 121 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 MAGEA13PA6NCF6 341 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM90A10PA6NDY2 464 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM90A18PA6NE21 464 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM90A16PA6NEW6 464 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM90A20PA6NIJ5 464 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM90A8PA6NJQ4 464 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM90A7PA6NKC0 464 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM90A22PA8MWA6 464 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM90A12PA8MX19 464 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM90A5PA8MXJ8 464 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM90A23PA8MXZ1 464 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 ODF3BA8MYP8 253 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 AIPO00170 330 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 F2RL2O00254 374 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 SPINT2O43291 252 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 DENRO43583 198 aaKnown RBP3.55□□□□□ -1.84
SNX1-205ENST00000559339 CA11O75493 328 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 NDUFA7O95182 113 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 BPNT1O95861 308 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM90A15PP0C7V4 464 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM90A13PP0C7W8 464 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM90A14PP0C7W9 464 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM90A24PP0C7X0 464 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM106CPP0CH98 169 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 ARSBP15848 533 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 MGMTP16455 207 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 CPEP16870 476 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 MDKP21741 143 aaPredicted RBP3.55□□□□□ -1.84
SNX1-205ENST00000559339 NFYBP25208 207 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 HTR2CP28335 458 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 DLX6P56179 175 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 GABARAPL2P60520 117 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 TPBGQ13641 420 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 TBCEQ15813 527 aaPredicted RBP3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM189A2Q15884 450 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 ARSJQ5FYB0 599 aaPredicted RBP3.55□□□□□ -1.84
SNX1-205ENST00000559339 PRAMEF5Q5TYX0 476 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 OLFML2AQ68BL7 652 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 SLC35E4Q6ICL7 350 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 RAB12Q6IQ22 244 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 HCP5Q6MZN7 132 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 C11orf88Q6PI97 169 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 TRAT1Q6PIZ9 186 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 CRIP3Q6Q6R5 217 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 SLC16A12Q6ZSM3 486 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 TCF23Q7RTU1 214 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 ZNF367Q7RTV3 350 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 RNF144BQ7Z419 303 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 LHFPL4Q7Z7J7 247 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 SVOPQ8N4V2 548 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 SUMF2Q8NBJ7 301 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 OR10A7Q8NGE5 316 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 OR4C13Q8NGP0 309 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 OR9G1Q8NH87 305 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 OR2T6Q8NHC8 308 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 KCNG3Q8TAE7 436 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 MRGPRDQ8TDS7 321 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 C17orf50Q8WW18 174 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FCGR1BQ92637 280 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 FAM46BQ96A09 425 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 RPEQ96AT9 228 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 ORAI1Q96D31 301 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 COQ2Q96H96 371 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 NEDD4LQ96PU5 975 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 OR5M11Q96RB7 305 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 NKX3-1Q99801 234 aaPredicted RBP3.55□□□□□ -1.84
SNX1-205ENST00000559339 YTHDF1Q9BYJ9 559 aaKnown RBP3.55□□□□□ -1.84
SNX1-205ENST00000559339 SELENOIQ9C0D9 397 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 PLGRKTQ9HBL7 147 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 ETAA1Q9NY74 926 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 KCNIP1Q9NZI2 227 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 DPM3Q9P2X0 92 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 KIF25Q9UIL4 384 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 TRAPPC2LQ9UL33 140 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 LSM2Q9Y333 95 aaKnown RBP3.55□□□□□ -1.84
SNX1-205ENST00000559339 AMMECR1Q9Y4X0 333 aaPredicted RBP3.55□□□□□ -1.84
SNX1-205ENST00000559339 RNF114Q9Y508 228 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 HILPDAQ9Y5L2 63 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 PEX16Q9Y5Y5 336 aa3.55□□□□□ -1.84
SNX1-205ENST00000559339 ANK3Q12955 4377 aaKnown RBP3.55□□□□□ -1.84
SNX1-205ENST00000559339 A0A087X0M5 115 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 A0A1B0GX30 115 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 A0A1W2PP11 408 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 OOSP1A8MZH6 123 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 BUB1B-PAK6H3BSN5 160 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 M0QZ24 198 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 CCRL2O00421 344 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 SDCBPO00560 298 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms