RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 COQ2Q96H96 371 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 C1orf159Q96HA4 380 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 C18orf12Q96KH6 178 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 COX4I2Q96KJ9 171 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 WDFY2Q96P53 400 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 MIXL1Q9H2W2 232 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 RIMS4Q9H426 269 aaPredicted RBP5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 AUNIPQ9H7T9 357 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 ZMAT3Q9HA38 289 aaKnown RBP5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 C12orf4Q9NQ89 552 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 C19orf12Q9NSK7 152 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 OR6C3Q9NZP0 311 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 ONECUT1Q9UBC0 465 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 RABL2AQ9UBK7 228 aaPredicted RBP5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 AK3Q9UIJ7 227 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 KIF25Q9UIL4 384 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 RPUSD1Q9UJJ7 312 aaKnown RBP5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 TRAPPC2LQ9UL33 140 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 RABL2BQ9UNT1 228 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 MRPS7Q9Y2R9 242 aaKnown RBP5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 LINC00312Q9Y6C7 94 aa5.46□□□□□ -1.54
CHRNA3-204ENST00000559002 MALRD1Q5VYJ5 2156 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 A0A0G2JMP0 313 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 A0A0X1KG70 313 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 hCG_1809904A0A1W2PP81 198 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 A0A1W2PPE2 198 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 A0A1W2PR64 198 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 A0A1W2PRV1 198 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 MEX3AA1L020 520 aaKnown RBP5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 FABP12A6NFH5 140 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 FCN3O75636 299 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 INHBBP09529 407 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 CD99P14209 185 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 GATA3P23771 443 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 TNFSF8P32971 234 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 PRSS3P35030 304 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 DVL1P1P54792 670 aaPredicted RBP5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 PITPNAQ00169 270 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 PAX5Q02548 391 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 ZNF273Q14593 569 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 ZNF260Q3ZCT1 412 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 SPANXN2Q5MJ10 180 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 C6orf183Q5T699 404 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 DCAF12L2Q5VW00 463 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 HACD4Q5VWC8 232 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 OLFML2AQ68BL7 652 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 TMEM200BQ69YZ2 307 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 TRAT1Q6PIZ9 186 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 FAM131AQ6UXB0 335 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 ZNF565Q8N9K5 539 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 OR4M2Q8NGB6 313 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 OR6Q1Q8NGQ2 317 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 OR13A1Q8NGR1 328 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 OR4K15Q8NH41 348 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 C8orf46Q8TAG6 207 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 MRPL30Q8TCC3 161 aaKnown RBP5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 MRGPRDQ8TDS7 321 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 CCDC107Q8WV48 283 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 NUDCD2Q8WVJ2 157 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 TMEM186Q96B77 213 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 MSI2Q96DH6 328 aaKnown RBP5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 ZNF714Q96N38 554 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 HDHD3Q9BSH5 251 aaPredicted RBP5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 GAL3ST2Q9H3Q3 398 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 NCOR1P1Q9H4R4 102 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 RAB9BQ9NP90 201 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 HIF1ANQ9NWT6 349 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 KCNIP1Q9NZI2 227 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 KCNS2Q9ULS6 477 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 MGAT4AQ9UM21 535 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 POLR3KQ9Y2Y1 108 aaPredicted RBP5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 MED13LQ71F56 2210 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 MTORP42345 2549 aa5.45□□□□□ -1.54
CHRNA3-204ENST00000559002 TRAV39A0A0B4J263 110 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 KIR2DS1A0A191URI9 304 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 ZNF729A6NN14 1252 aaPredicted RBP5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 POM121CA8CG34 1229 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 M0R1W7 72 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 SPINT2O43291 252 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 TPPPO94811 219 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 NAPSAO96009 420 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 MT-ND4P03905 459 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 FCGR3AP08637 254 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 ZNF728P0DKX0 622 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 PTHLHP12272 177 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 CCL3L1P16619 93 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 GZMHP20718 246 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 DTYMKP23919 212 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 CBX5P45973 191 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 ARF6P62330 175 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 MRPS10P82664 201 aaKnown RBP5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 RNASE12Q5GAN4 147 aaKnown RBP5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 METTL11BQ5VVY1 283 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 PYHIN1Q6K0P9 492 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 FAHD2BQ6P2I3 314 aaPredicted RBP5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 CSPG4Q6UVK1 2322 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 GAPTQ8N292 157 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 PRR18Q8N4B5 295 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 KIR3DL3Q8N743 410 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms