RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 Q6ZT83 130 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 GALNT10Q86SR1 603 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 MRPL52Q86TS9 123 aaKnown RBP1.25□□□□□ -2.21
VPS13C-207ENST00000558919 PLCZ1Q86YW0 608 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 AMN1Q8IY45 258 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 BOD1L2Q8IYS8 172 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 C3orf22Q8N5N4 141 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 ACBD4Q8NC06 268 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 ZNF738Q8NE65 137 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 OR6K3Q8NGY3 331 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 OR8S1Q8NH09 359 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 DDI1Q8WTU0 396 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.25□□□□□ -2.21
VPS13C-207ENST00000558919 RBPMSQ93062 196 aaKnown RBP1.25□□□□□ -2.21
VPS13C-207ENST00000558919 PPWD1Q96BP3 646 aaKnown RBP1.25□□□□□ -2.21
VPS13C-207ENST00000558919 CCDC127Q96BQ5 260 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 ZMYND19Q96E35 227 aaPredicted RBP1.25□□□□□ -2.21
VPS13C-207ENST00000558919 FMC1Q96HJ9 113 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 ARL5BQ96KC2 179 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 PITX2Q99697 317 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 ZNF251Q9BRH9 671 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 DCUN1D5Q9BTE7 237 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 UPF3BQ9BZI7 483 aaKnown RBP1.25□□□□□ -2.21
VPS13C-207ENST00000558919 EURLQ9NYK6 297 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 RBM12B-AS1Q9P1G2 102 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 PSMD13Q9UNM6 376 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 ATP6V1DQ9Y5K8 247 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 TRAPPC1Q9Y5R8 145 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 ZNF706Q9Y5V0 76 aaPredicted RBP1.25□□□□□ -2.21
VPS13C-207ENST00000558919 USH1CQ9Y6N9 552 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 IGKV1OR2-108A0A075B7D4 117 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 IGHV3-21A0A0B4J1V1 117 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 A0A1B0GX12 115 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 A0A1W2PRG6 482 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 TMEM213A2RRL7 107 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 LEUTXA8MZ59 168 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 H3BQ85 93 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 K7ERS5 55 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 ISLRO14498 428 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 CDIPTO14735 213 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 ENTPD6O75354 484 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 HLA-AP01891 365 aaKnown RBP1.24□□□□□ -2.21
VPS13C-207ENST00000558919 GP1BAP07359 652 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 SOD3P08294 240 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 SCGB1C2P0DMR2 95 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 MLNP12872 115 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 M6PRP20645 277 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 CNTFRP26992 372 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 PSMB6P28072 239 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 PLTPP55058 493 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 AQP5P55064 265 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 UBE2G2P60604 165 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 RHOAP61586 193 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 CD164Q04900 197 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 RAB31Q13636 194 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 ZBTB6Q15916 424 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 TMEM241Q24JQ0 296 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 TMEM249Q2WGJ8 235 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 KRTAP25-1Q3LHN0 102 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 ACTBL2Q562R1 376 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 OR10J3Q5JRS4 329 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 ZNF773Q6PK81 442 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 TMEM25Q86YD3 366 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 C10orf107Q8IVU9 208 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 OR2M3Q8NG83 312 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 OR2K2Q8NGT1 345 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 OR5AK3PQ8NH89 298 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 OR2AE1Q8NHA4 323 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 SCGB1C1Q8TD33 95 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 RNASEH2CQ8TDP1 164 aaKnown RBP1.24□□□□□ -2.21
VPS13C-207ENST00000558919 OR5P2Q8WZ92 322 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 RORBQ92753 470 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 OTUB2Q96DC9 234 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 PYURFQ96I23 114 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 ZNF514Q96K75 400 aaPredicted RBP1.24□□□□□ -2.21
VPS13C-207ENST00000558919 APOL4Q9BPW4 351 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 C7orf50Q9BRJ6 194 aaKnown RBP1.24□□□□□ -2.21
VPS13C-207ENST00000558919 SUCNR1Q9BXA5 334 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 TXNIPQ9H3M7 391 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 POMKQ9H5K3 350 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 PARVGQ9HBI0 331 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 C1orf109Q9NX04 203 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 NKIRAS1Q9NYS0 192 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 SCML1Q9UN30 329 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 C14orf166Q9Y224 244 aaKnown RBP1.24□□□□□ -2.21
VPS13C-207ENST00000558919 SNX24Q9Y343 169 aa1.24□□□□□ -2.21
VPS13C-207ENST00000558919 PUS1Q9Y606 427 aaKnown RBP eCLIP1.24□□□□□ -2.21
VPS13C-207ENST00000558919 A0A0A6YYH2 397 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 TRAV8-3A0A0A6YYJ7 113 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 FABP12A6NFH5 140 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 A6NJ64 397 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 F5H5P2 479 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 ITGB1BP1O14713 200 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 NIPSNAP2O75323 286 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 E2F6O75461 281 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 BRI3O95415 125 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 IGHV3-53P01767 116 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 SLC2A1P11166 492 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 ZNF3P17036 446 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 PVALBP20472 110 aaPredicted RBP1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms