RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 MAB21L2Q9Y586 359 aa13.08□□□□□ -0.32
CDC42BPB-203ENST00000558867 IGKV1-9A0A0C4DH69 117 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 A0A1W2PRD5 423 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 A0A1W2PRF3 423 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 A0A1W2PRM7 423 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 NKX6-3A6NJ46 265 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 H3BUX3 64 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 PLA2G10O15496 165 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 CDK2P24941 298 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 GSK3AP49840 483 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 QRFPP83859 136 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 FAM3AP98173 230 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 SSBP1Q04837 148 aaKnown RBP13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 IKZF1Q13422 519 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 GFOD2Q3B7J2 385 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 VAX1Q5SQQ9 334 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 TMEM69Q5SWH9 247 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 RAB12Q6IQ22 244 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 MZT2BQ6NZ67 158 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 KLHDC1Q8N7A1 406 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 C11orf44Q8N8P7 122 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 OR4F17Q8NGA8 305 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 OR56B2PQ8NGI1 322 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 OR4D6Q8NGJ1 314 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 OR2AE1Q8NHA4 323 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 PPP1R14BQ96C90 147 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 MED30Q96HR3 178 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 OR4F4Q96R69 305 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 SSX3Q99909 188 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 NPFFR1Q9GZQ6 430 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 DNTTIP1Q9H147 329 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 RBFOX1Q9NWB1 397 aaKnown RBP13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 DNAJB11Q9UBS4 358 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 RAB22AQ9UL26 194 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 PIGLQ9Y2B2 252 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 N6AMT1Q9Y5N5 214 aa13.07□□□□□ -0.32
CDC42BPB-203ENST00000558867 TMEM14DPA8MWL7 114 aa13.06□□□□□ -0.32
CDC42BPB-203ENST00000558867 M0R1W7 72 aa13.06□□□□□ -0.32
CDC42BPB-203ENST00000558867 FAHP16930 419 aa13.06□□□□□ -0.32
CDC42BPB-203ENST00000558867 PRKACBP22694 351 aa13.06□□□□□ -0.32
CDC42BPB-203ENST00000558867 ACKR3P25106 362 aa13.06□□□□□ -0.32
CDC42BPB-203ENST00000558867 RFX2P48378 723 aa13.06□□□□□ -0.32
CDC42BPB-203ENST00000558867 TAS2R20P59543 309 aa13.06□□□□□ -0.32
CDC42BPB-203ENST00000558867 DYRK1AQ13627 763 aa13.06□□□□□ -0.32
CDC42BPB-203ENST00000558867 CNN3Q15417 329 aaKnown RBP13.06□□□□□ -0.32
CDC42BPB-203ENST00000558867 CLVS2Q5SYC1 327 aa13.06□□□□□ -0.32
CDC42BPB-203ENST00000558867 LIAT1Q6ZQX7 453 aa13.06□□□□□ -0.32
CDC42BPB-203ENST00000558867 DUSP18Q8NEJ0 188 aa13.06□□□□□ -0.32
CDC42BPB-203ENST00000558867 C8orf46Q8TAG6 207 aa13.06□□□□□ -0.32
CDC42BPB-203ENST00000558867 C11orf54Q9H0W9 315 aaPredicted RBP13.06□□□□□ -0.32
CDC42BPB-203ENST00000558867 NOTCH3Q9UM47 2321 aa13.06□□□□□ -0.32
CDC42BPB-203ENST00000558867 SULT1C2O00338 296 aa13.05□□□□□ -0.32
CDC42BPB-203ENST00000558867 LYRM1O43325 122 aa13.05□□□□□ -0.32
CDC42BPB-203ENST00000558867 VSIG10L2P0DP72 767 aa13.05□□□□□ -0.32
CDC42BPB-203ENST00000558867 INPP1P49441 399 aa13.05□□□□□ -0.32
CDC42BPB-203ENST00000558867 UBE2V2Q15819 145 aa13.05□□□□□ -0.32
CDC42BPB-203ENST00000558867 AANATQ16613 207 aa13.05□□□□□ -0.32
CDC42BPB-203ENST00000558867 LRRC75BQ2VPJ9 315 aa13.05□□□□□ -0.32
CDC42BPB-203ENST00000558867 NSUN5P1Q3KNT7 163 aa13.05□□□□□ -0.32
CDC42BPB-203ENST00000558867 OXLD1Q5BKU9 147 aa13.05□□□□□ -0.32
CDC42BPB-203ENST00000558867 CRIP3Q6Q6R5 217 aa13.05□□□□□ -0.32
CDC42BPB-203ENST00000558867 CCBE1Q6UXH8 406 aaPredicted RBP13.05□□□□□ -0.32
CDC42BPB-203ENST00000558867 FTMTQ8N4E7 242 aa13.05□□□□□ -0.32
CDC42BPB-203ENST00000558867 FAM216BQ8N7L0 139 aa13.05□□□□□ -0.32
CDC42BPB-203ENST00000558867 OR5D13Q8NGL4 314 aa13.05□□□□□ -0.32
CDC42BPB-203ENST00000558867 SIGLEC9Q9Y336 463 aa13.05□□□□□ -0.32
CDC42BPB-203ENST00000558867 METTL21EPA6NDL7 271 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 PEX14O75381 377 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 FBXO24O75426 580 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 FCN3O75636 299 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 HCKP08631 526 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 BCAP31P51572 246 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 AP3S2P59780 193 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 DGCR2P98153 550 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 KLRD1Q13241 179 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 KISS1Q15726 138 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 LY6EQ16553 131 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 ATPAF1Q5TC12 328 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 WDR82Q6UXN9 313 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 NRARPQ7Z6K4 114 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 Q8N7P7 452 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 CSNK2A3Q8NEV1 391 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 KCNG3Q8TAE7 436 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 TNFRSF14Q92956 283 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 PHF21AQ96BD5 680 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 MICU1Q9BPX6 476 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 SCPEP1Q9HB40 452 aa13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 MRPS28Q9Y2Q9 187 aaKnown RBP13.04□□□□□ -0.32
CDC42BPB-203ENST00000558867 FUOMA2VDF0 154 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 A6NIN4 97 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 LANCL1O43813 399 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 CHRM2P08172 466 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 VSIG8P0DPA2 414 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 NDUFB7P17568 137 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 PLA2G7Q13093 441 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 UNC119Q13432 240 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 AWAT2Q6E213 333 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 ASCL4Q6XD76 172 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 LHFPL2Q6ZUX7 228 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 ANGPTL5Q86XS5 388 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms