RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 KIAA2026Q5HYC2 2103 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 SYT3Q9BQG1 590 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 MRPL37Q9BZE1 423 aaKnown RBP10.9□□□□□ -0.66
SMAD3-207ENST00000558763 TMEM165Q9HC07 324 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 CHMP1AQ9HD42 196 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-207ENST00000558763 TREM2Q9NZC2 230 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 SHPKQ9UHJ6 478 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 ATP23Q9Y6H3 246 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 GCN1Q92616 2671 aaKnown RBP10.9□□□□□ -0.66
SMAD3-207ENST00000558763 DPRXA6NFQ7 191 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 SIRPB1O00241 398 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 TUSC2O75896 110 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 RCC1P18754 421 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-207ENST00000558763 CXCL2P19875 107 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 AADACP22760 399 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 NFYAP23511 347 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-207ENST00000558763 LMO1P25800 156 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 CEBPDP49716 269 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-207ENST00000558763 KLF3P57682 345 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-207ENST00000558763 SLC9A3R2Q15599 337 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 C11orf88Q6PI97 169 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 ACP7Q6ZNF0 438 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 ZNF497Q6ZNH5 498 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 NEK7Q8TDX7 302 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 RIMS4Q9H426 269 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-207ENST00000558763 UFSP2Q9NUQ7 469 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 DUSP13Q9UII6 198 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 CRYM-AS1A6NIL9 109 aa10.89□□□□□ -0.67
SMAD3-207ENST00000558763 TRDCB7Z8K6 153 aa10.89□□□□□ -0.67
SMAD3-207ENST00000558763 PSPNO60542 156 aa10.89□□□□□ -0.67
SMAD3-207ENST00000558763 HAND1O96004 215 aa10.89□□□□□ -0.67
SMAD3-207ENST00000558763 PPYP01298 95 aa10.89□□□□□ -0.67
SMAD3-207ENST00000558763 PGAM2P15259 253 aa10.89□□□□□ -0.67
SMAD3-207ENST00000558763 KCNJ3P48549 501 aa10.89□□□□□ -0.67
SMAD3-207ENST00000558763 UCP3P55916 312 aa10.89□□□□□ -0.67
SMAD3-207ENST00000558763 RBM39Q14498 530 aaKnown RBP10.89□□□□□ -0.67
SMAD3-207ENST00000558763 PAN3Q58A45 887 aaKnown RBP10.89□□□□□ -0.67
SMAD3-207ENST00000558763 TMEM108Q6UXF1 575 aa10.89□□□□□ -0.67
SMAD3-207ENST00000558763 NUP37Q8NFH4 326 aa10.89□□□□□ -0.67
SMAD3-207ENST00000558763 OR2Z1Q8NG97 314 aa10.89□□□□□ -0.67
SMAD3-207ENST00000558763 SPEF1Q9Y4P9 236 aa10.89□□□□□ -0.67
SMAD3-207ENST00000558763 KIR2DS1A0A191URI9 304 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 ATP6V1G1O75348 118 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 KNG1P01042 644 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 ZNF728P0DKX0 622 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 EGR1P18146 543 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 KIR2DS4P43632 304 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 BSPH1Q075Z2 132 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 KIR2DS1Q14954 304 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 VHLLQ6RSH7 139 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 LDLRAD3Q86YD5 345 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 TOMM40LQ969M1 308 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 CABLES2Q9BTV7 478 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 NGBQ9NPG2 151 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 C14orf166Q9Y224 244 aaKnown RBP10.88□□□□□ -0.67
SMAD3-207ENST00000558763 SPTAN1Q13813 2472 aaKnown RBP10.88□□□□□ -0.67
SMAD3-207ENST00000558763 DSCAMO60469 2012 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 ARID1AO14497 2285 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 PKDREJQ9NTG1 2253 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 A6NLC8 198 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 HMSDA8MTL9 139 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 ABCD4O14678 606 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 MPC2O95563 127 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 TFF1P04155 84 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 SSTR2P30874 369 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 CFHR2P36980 270 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 MDH2P40926 338 aaKnown RBP10.88□□□□□ -0.67
SMAD3-207ENST00000558763 FXYD4P59646 89 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 HLA-DRB3P79483 266 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 KCTD9Q7L273 389 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 SSX8Q7RTT4 187 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 MRPL24Q96A35 216 aaKnown RBP10.88□□□□□ -0.67
SMAD3-207ENST00000558763 ELMOD3Q96FG2 381 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 RSRP1Q9BUV0 290 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 SLC2A9Q9NRM0 540 aa10.88□□□□□ -0.67
SMAD3-207ENST00000558763 MBNL3Q9NUK0 354 aaKnown RBP10.88□□□□□ -0.67
SMAD3-207ENST00000558763 HRNRQ86YZ3 2850 aaPredicted RBP10.87□□□□□ -0.67
SMAD3-207ENST00000558763 IGKV1D-13A0A0B4J2D9 117 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.87□□□□□ -0.67
SMAD3-207ENST00000558763 A1L4Q6 167 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 RFPL4AA6NLU0 287 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 MPTX1A8MV57 137 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 SRRM5B3KS81 715 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 RFPL4AL1F8VTS6 287 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 SH2D1BO14796 132 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 ADAP1O75689 374 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 IGKV1-13P0DP09 117 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 PTAFRP25105 342 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 GLP1RP43220 463 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 ZNF81P51508 661 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 PIGPP57054 158 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 SEC61A1P61619 476 aaKnown RBP10.87□□□□□ -0.67
SMAD3-207ENST00000558763 RPS23P62266 143 aaKnown RBP10.87□□□□□ -0.67
SMAD3-207ENST00000558763 ATXN7L3Q14CW9 347 aaPredicted RBP10.87□□□□□ -0.67
SMAD3-207ENST00000558763 ADAM5Q6NVV9 412 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 OR11L1Q8NGX0 322 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 PLPPR2Q96GM1 343 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 SEC22AQ96IW7 307 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 MEGF10Q96KG7 1140 aa10.87□□□□□ -0.67
SMAD3-207ENST00000558763 OR2V2Q96R30 315 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms