RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 MRPL28Q13084 256 aaKnown RBP12.36□□□□□ -0.43
TPM1-211ENST00000558314 SMN1Q16637 294 aaKnown RBP12.36□□□□□ -0.43
TPM1-211ENST00000558314 KLHL22Q53GT1 634 aa12.36□□□□□ -0.43
TPM1-211ENST00000558314 NEK7Q8TDX7 302 aa12.36□□□□□ -0.43
TPM1-211ENST00000558314 CCDC107Q8WV48 283 aa12.36□□□□□ -0.43
TPM1-211ENST00000558314 RGP1Q92546 391 aaPredicted RBP12.36□□□□□ -0.43
TPM1-211ENST00000558314 ORAI1Q96D31 301 aa12.36□□□□□ -0.43
TPM1-211ENST00000558314 METTL9Q9H1A3 318 aa12.36□□□□□ -0.43
TPM1-211ENST00000558314 FAM118AQ9NWS6 357 aa12.36□□□□□ -0.43
TPM1-211ENST00000558314 PSG11Q9UQ72 335 aa12.36□□□□□ -0.43
TPM1-211ENST00000558314 SERPINE3A8MV23 424 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 NUDT19A8MXV4 375 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 OOSP1A8MZH6 123 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 E9PQ18 207 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 M0QZK8 103 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 CSTBP04080 98 aaKnown RBP12.35□□□□□ -0.43
TPM1-211ENST00000558314 SERPINA2P20848 420 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 HOXD3P31249 432 aaPredicted RBP12.35□□□□□ -0.43
TPM1-211ENST00000558314 REG1BP48304 166 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 MADCAM1Q13477 382 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 IL13RA2Q14627 380 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 ATAD3CQ5T2N8 411 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 DDI2Q5TDH0 399 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 OR2G6Q5TZ20 316 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 RSBN1Q5VWQ0 802 aaPredicted RBP12.35□□□□□ -0.43
TPM1-211ENST00000558314 XAF1Q6GPH4 301 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 MOB3BQ86TA1 216 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 OSR2Q8N2R0 312 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 SUMF2Q8NBJ7 301 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 ZNF555Q8NEP9 628 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 PXT1Q8NFP0 134 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 GPR148Q8TDV2 347 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 NOL4LQ96MY1 436 aaPredicted RBP12.35□□□□□ -0.43
TPM1-211ENST00000558314 DPCDQ9BVM2 203 aaPredicted RBP12.35□□□□□ -0.43
TPM1-211ENST00000558314 PCDHB16Q9NRJ7 776 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 ST3GAL6Q9Y274 331 aa12.35□□□□□ -0.43
TPM1-211ENST00000558314 A0A087X0M5 115 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 IGHV3-72A0A0B4J1Y9 119 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 A0A1B0GX30 115 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 IGKV1D-33P01593 117 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 IGKV1-33P01594 117 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 LIMS3P0CW19 117 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 LIMS4P0CW20 117 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 ETV1P50549 477 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 ELP2Q6IA86 826 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 C10orf67Q8IYJ2 551 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 WFDC9Q8NEX5 89 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 OR13C5Q8NGS8 318 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 HAVCR2Q8TDQ0 301 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 APH1BQ8WW43 257 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 TMEM106AQ96A25 262 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 S100A14Q9HCY8 104 aa12.34□□□□□ -0.43
TPM1-211ENST00000558314 IGHV3-43A0A0B4J1X8 118 aa12.33□□□□□ -0.44
TPM1-211ENST00000558314 A0A1W2PPI3 338 aa12.33□□□□□ -0.44
TPM1-211ENST00000558314 NCBP2LA6PVI3 153 aaKnown RBP12.33□□□□□ -0.44
TPM1-211ENST00000558314 CGB3P0DN86 165 aa12.33□□□□□ -0.44
TPM1-211ENST00000558314 CGB7P0DN87 165 aa12.33□□□□□ -0.44
TPM1-211ENST00000558314 IGHV3-43DP0DP04 118 aa12.33□□□□□ -0.44
TPM1-211ENST00000558314 ZNF93P35789 620 aaPredicted RBP12.33□□□□□ -0.44
TPM1-211ENST00000558314 RPL22L1Q6P5R6 122 aaKnown RBP12.33□□□□□ -0.44
TPM1-211ENST00000558314 TMPRSS11AQ6ZMR5 421 aa12.33□□□□□ -0.44
TPM1-211ENST00000558314 OR52N1Q8NH53 320 aa12.33□□□□□ -0.44
TPM1-211ENST00000558314 TMEM30CPA0ZSE6 113 aa12.32□□□□□ -0.44
TPM1-211ENST00000558314 CCRL2O00421 344 aa12.32□□□□□ -0.44
TPM1-211ENST00000558314 SDCBPO00560 298 aaPredicted RBP12.32□□□□□ -0.44
TPM1-211ENST00000558314 HSD17B6O14756 317 aa12.32□□□□□ -0.44
TPM1-211ENST00000558314 GEMIN2O14893 280 aaKnown RBP12.32□□□□□ -0.44
TPM1-211ENST00000558314 BDKRB2P30411 391 aa12.32□□□□□ -0.44
TPM1-211ENST00000558314 RAB7AP51149 207 aa12.32□□□□□ -0.44
TPM1-211ENST00000558314 RAB25P57735 213 aa12.32□□□□□ -0.44
TPM1-211ENST00000558314 SLC22A6Q4U2R8 563 aa12.32□□□□□ -0.44
TPM1-211ENST00000558314 FAM53AQ6NSI3 398 aaPredicted RBP12.32□□□□□ -0.44
TPM1-211ENST00000558314 C18orf65Q6ZTR6 163 aa12.32□□□□□ -0.44
TPM1-211ENST00000558314 PQLC1Q8N2U9 271 aa12.32□□□□□ -0.44
TPM1-211ENST00000558314 C5orf56Q8N8D9 126 aa12.32□□□□□ -0.44
TPM1-211ENST00000558314 ZFP41Q8N8Y5 198 aa12.32□□□□□ -0.44
TPM1-211ENST00000558314 OR51D1Q8NGF3 324 aa12.32□□□□□ -0.44
TPM1-211ENST00000558314 ARL11Q969Q4 196 aa12.32□□□□□ -0.44
TPM1-211ENST00000558314 RCC1LQ96I51 464 aaKnown RBP12.32□□□□□ -0.44
TPM1-211ENST00000558314 TMEM138Q9NPI0 162 aa12.32□□□□□ -0.44
TPM1-211ENST00000558314 SIRT4Q9Y6E7 314 aaPredicted RBP12.32□□□□□ -0.44
TPM1-211ENST00000558314 PNMA8CA0A1B0GUJ8 204 aa12.31□□□□□ -0.44
TPM1-211ENST00000558314 A0A1W2PP11 408 aa12.31□□□□□ -0.44
TPM1-211ENST00000558314 K7EIL1 84 aa12.31□□□□□ -0.44
TPM1-211ENST00000558314 MYL12AP19105 171 aa12.31□□□□□ -0.44
TPM1-211ENST00000558314 KCNJ3P48549 501 aa12.31□□□□□ -0.44
TPM1-211ENST00000558314 RBM11P57052 281 aaKnown RBP12.31□□□□□ -0.44
TPM1-211ENST00000558314 ZNF529Q6P280 563 aa12.31□□□□□ -0.44
TPM1-211ENST00000558314 C8orf86Q6ZUL3 223 aa12.31□□□□□ -0.44
TPM1-211ENST00000558314 SLC35E3Q7Z769 313 aa12.31□□□□□ -0.44
TPM1-211ENST00000558314 THNSL2Q86YJ6 484 aa12.31□□□□□ -0.44
TPM1-211ENST00000558314 KLHL30-AS1Q8NEE0 82 aa12.31□□□□□ -0.44
TPM1-211ENST00000558314 CHPT1Q8WUD6 406 aa12.31□□□□□ -0.44
TPM1-211ENST00000558314 CYGBQ8WWM9 190 aa12.31□□□□□ -0.44
TPM1-211ENST00000558314 DPF1Q92782 380 aa12.31□□□□□ -0.44
TPM1-211ENST00000558314 ZNF184Q99676 751 aaPredicted RBP12.31□□□□□ -0.44
TPM1-211ENST00000558314 FGF20Q9NP95 211 aaPredicted RBP12.31□□□□□ -0.44
TPM1-211ENST00000558314 CHCHD3Q9NX63 227 aaKnown RBP12.31□□□□□ -0.44
TPM1-211ENST00000558314 SMPD3Q9NY59 655 aaPredicted RBP12.31□□□□□ -0.44
TPM1-211ENST00000558314 ZNF281Q9Y2X9 895 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms