RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SUN5Q8TC36 379 aa8.96□□□□□ -0.97
TPM1-210ENST00000558264 C18orf12Q96KH6 178 aa8.96□□□□□ -0.97
TPM1-210ENST00000558264 PRRX2Q99811 253 aa8.96□□□□□ -0.97
TPM1-210ENST00000558264 USB1Q9BQ65 265 aaKnown RBP8.96□□□□□ -0.97
TPM1-210ENST00000558264 SYT3Q9BQG1 590 aa8.96□□□□□ -0.97
TPM1-210ENST00000558264 SHARPINQ9H0F6 387 aa8.96□□□□□ -0.97
TPM1-210ENST00000558264 FBXL17Q9UF56 701 aa8.96□□□□□ -0.97
TPM1-210ENST00000558264 ATP23Q9Y6H3 246 aa8.96□□□□□ -0.97
TPM1-210ENST00000558264 ANKRD11Q6UB99 2663 aaPredicted RBP8.96□□□□□ -0.98
TPM1-210ENST00000558264 NKX2-6A6NCS4 301 aa8.96□□□□□ -0.98
TPM1-210ENST00000558264 A6NLC8 198 aa8.96□□□□□ -0.98
TPM1-210ENST00000558264 MLNRO43193 412 aa8.96□□□□□ -0.98
TPM1-210ENST00000558264 Q6P435 159 aa8.96□□□□□ -0.98
TPM1-210ENST00000558264 INO80CQ6PI98 192 aaPredicted RBP8.96□□□□□ -0.98
TPM1-210ENST00000558264 LGI3Q8N145 548 aa8.96□□□□□ -0.98
TPM1-210ENST00000558264 OR51H1Q8NH63 302 aa8.96□□□□□ -0.98
TPM1-210ENST00000558264 WNT2BQ93097 391 aa8.96□□□□□ -0.98
TPM1-210ENST00000558264 STARD4Q96DR4 205 aa8.96□□□□□ -0.98
TPM1-210ENST00000558264 DHRS9Q9BPW9 319 aa8.96□□□□□ -0.98
TPM1-210ENST00000558264 MAGT1Q9H0U3 335 aa8.96□□□□□ -0.98
TPM1-210ENST00000558264 SMG1Q96Q15 3661 aaKnown RBP8.95□□□□□ -0.98
TPM1-210ENST00000558264 LRP5LA4QPB2 252 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 NUPL2O15504 423 aaKnown RBP8.95□□□□□ -0.98
TPM1-210ENST00000558264 APOC3P02656 99 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 CEACAM1P13688 526 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 TMEM33P57088 247 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 PCSK4Q6UW60 755 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 CCDC71LQ8N9Z2 235 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 GTF3AQ92664 365 aaKnown RBP8.95□□□□□ -0.98
TPM1-210ENST00000558264 MARVELD3Q96A59 401 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 PHYHIPLQ96FC7 376 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 SUCNR1Q9BXA5 334 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 TMEM231Q9H6L2 316 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 MED9Q9NWA0 146 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 ERRFI1Q9UJM3 462 aaPredicted RBP8.95□□□□□ -0.98
TPM1-210ENST00000558264 TUBD1Q9UJT1 453 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 ZDHHC8Q9ULC8 765 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 APC2O95996 2303 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 KIR2DS1A0A191URI9 304 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 TIMM8AO60220 97 aaPredicted RBP8.95□□□□□ -0.98
TPM1-210ENST00000558264 COX5AP20674 150 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 KIR2DS4P43632 304 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 ID4P47928 161 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 UCP3P55916 312 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 SRSF3P84103 164 aaKnown RBP8.95□□□□□ -0.98
TPM1-210ENST00000558264 KIR2DS1Q14954 304 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 IZUMO4Q1ZYL8 232 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 ZNF695Q8IW36 515 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 BPIFCQ8NFQ6 507 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 STOML3Q8TAV4 291 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 PKIBQ9C010 78 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 TRAPPC2LQ9UL33 140 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 PROCRQ9UNN8 238 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 AMDHD2Q9Y303 409 aa8.95□□□□□ -0.98
TPM1-210ENST00000558264 HEATR1Q9H583 2144 aaKnown RBP8.94□□□□□ -0.98
TPM1-210ENST00000558264 ZNF705EA8MWA4 302 aaPredicted RBP8.94□□□□□ -0.98
TPM1-210ENST00000558264 PROB1E7EW31 1015 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 H7C1Q1 480 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 CDK2AP1O14519 115 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 CEACAM4O75871 244 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 IGKV3-15P01624 115 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 RAC2P15153 192 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 CBR1P16152 277 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 PMELP40967 661 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 ZNF83P51522 516 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 BTN1A1Q13410 526 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 ATRAIDQ6UW56 229 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 HSD17B13Q7Z5P4 300 aaPredicted RBP8.94□□□□□ -0.98
TPM1-210ENST00000558264 OR10J5Q8NHC4 309 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 PLK3Q9H4B4 646 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 TAF9BQ9HBM6 251 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 SPACA1Q9HBV2 294 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 FBXO9Q9UK97 447 aaPredicted RBP8.94□□□□□ -0.98
TPM1-210ENST00000558264 RCL1Q9Y2P8 373 aaKnown RBP8.94□□□□□ -0.98
TPM1-210ENST00000558264 BSNQ9UPA5 3926 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 IGHV1-18A0A0C4DH31 117 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 MED19A0JLT2 244 aaPredicted RBP8.94□□□□□ -0.98
TPM1-210ENST00000558264 IQCF6A8MYZ5 107 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 GPR31O00270 319 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 GPR37O15354 613 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 ADAM20O43506 726 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 EPHA1P21709 976 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 KCNJ3P48549 501 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 HLA-DRB3P79483 266 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 NHLH2Q02577 135 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 VHLLQ6RSH7 139 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 Q6ZR03 302 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 TPRX1Q8N7U7 411 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 LILRB1Q8NHL6 650 aaPredicted RBP8.94□□□□□ -0.98
TPM1-210ENST00000558264 NRIP2Q9BQI9 281 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 TMEM222Q9H0R3 208 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 HRH4Q9H3N8 390 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 PLSCR2Q9NRY7 297 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 TMEM100Q9NV29 134 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 DNAJB11Q9UBS4 358 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 PURGQ9UJV8 347 aaKnown RBP8.94□□□□□ -0.98
TPM1-210ENST00000558264 ACACAQ13085 2346 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 ICE1Q9Y2F5 2266 aa8.94□□□□□ -0.98
TPM1-210ENST00000558264 AGPAT2O15120 278 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 HSPA12AO43301 675 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms