RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 PSG4Q00888 419 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 PNRC1Q12796 327 aaPredicted RBP10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 PCOLCEQ15113 449 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 SLC25A24Q6NUK1 477 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 CALHM1Q8IU99 346 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 IL22RA2Q969J5 263 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 S100PBPQ96BU1 408 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 Q9N2K0 584 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 SLC22A20A6NK97 555 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 OR5H1A6NKK0 313 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 SLC33A1O00400 549 aaPredicted RBP10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 BCAT2O15382 392 aaPredicted RBP10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 KLK3P07288 261 aaPredicted RBP10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 NPBWR2P48146 333 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 CLDN15P56746 228 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 RAB11AP62491 216 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 PDZD11Q5EBL8 140 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 GFI1BQ5VTD9 330 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 H1FOOQ8IZA3 346 aaPredicted RBP10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 BATF2Q8N1L9 274 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 OR5D13Q8NGL4 314 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 NAT6Q93015 286 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 TMEM242Q9NWH2 141 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 GNG13Q9P2W3 67 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 G3V3Y1 287 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 CLDN34H7C241 214 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 DNPH1O43598 174 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 NXPH3O95157 252 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 LY86O95711 162 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 CELA2AP08217 269 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 TRGC1P0CF51 173 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 PCBD1P61457 104 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 DAZAP2Q15038 168 aaPredicted RBP10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 MRPL14Q6P1L8 145 aaKnown RBP10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 THNSL2Q86YJ6 484 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 M1APQ8TC57 530 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 GPHA2Q96T91 129 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 OR2H1Q9GZK4 316 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 WNT5BQ9H1J7 359 aa10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 CISD1Q9NZ45 108 aaKnown RBP10.16□□□□□ -0.78
VIPAS39-211ENST00000557658 CEP290O15078 2479 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 IGKV1D-13A0A0B4J2D9 117 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 H0Y980 276 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 SCTP09683 121 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 IGKV1-13P0DP09 117 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 SRFP11831 508 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 RND2P52198 227 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 PAX9P55771 341 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 RAC3P60763 192 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 RPS18P62269 152 aaKnown RBP10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM90A2PQ658T7 463 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 AAED1Q7RTV5 226 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 FRZBQ92765 325 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 ALKBH3Q96Q83 286 aaPredicted RBP10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 PROK2Q9HC23 129 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 CCL28Q9NRJ3 127 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 UFSP2Q9NUQ7 469 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 RNF115Q9Y4L5 304 aa10.15□□□□□ -0.78
VIPAS39-211ENST00000557658 KIR2DS1A0A191URI9 304 aa10.15□□□□□ -0.79
VIPAS39-211ENST00000557658 ATXN7O15265 892 aaPredicted RBP10.15□□□□□ -0.79
VIPAS39-211ENST00000557658 TUSC2O75896 110 aa10.15□□□□□ -0.79
VIPAS39-211ENST00000557658 NAPSAO96009 420 aa10.15□□□□□ -0.79
VIPAS39-211ENST00000557658 CYB5R3P00387 301 aaPredicted RBP10.15□□□□□ -0.79
VIPAS39-211ENST00000557658 CTXN2P0C2S0 81 aa10.15□□□□□ -0.79
VIPAS39-211ENST00000557658 KIR2DS4P43632 304 aa10.15□□□□□ -0.79
VIPAS39-211ENST00000557658 SSTP61278 116 aa10.15□□□□□ -0.79
VIPAS39-211ENST00000557658 KIR2DS1Q14954 304 aa10.15□□□□□ -0.79
VIPAS39-211ENST00000557658 Q8NFD4 153 aa10.15□□□□□ -0.79
VIPAS39-211ENST00000557658 ABHD5Q8WTS1 349 aa10.15□□□□□ -0.79
VIPAS39-211ENST00000557658 FOXB1Q99853 325 aa10.15□□□□□ -0.79
VIPAS39-211ENST00000557658 TAAR3PQ9P1P4 343 aa10.15□□□□□ -0.79
VIPAS39-211ENST00000557658 CA14Q9ULX7 337 aa10.15□□□□□ -0.79
VIPAS39-211ENST00000557658 PIGBOS1A0A0B4J2F0 54 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 IGHV5-10-1A0A0J9YXX1 117 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 A0A1B0GU03 582 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 CBR3O75828 277 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 BCL2P10415 239 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 FABP4P15090 132 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 S100GP29377 79 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 SSR4P51571 173 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 ZNF787Q6DD87 383 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 C5orf24Q7Z6I8 188 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 C14orf144Q96I85 54 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 AKIRIN1Q9H9L7 192 aaPredicted RBP10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 LAMA1P25391 3075 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 LOC102723996A0A087X1L8 192 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 ZFP92A6NM28 416 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 BCL3P20749 454 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 PKIAP61925 76 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 CCL7P80098 99 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 GAMTQ14353 236 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 HERPUD1Q15011 391 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 CEACAM16Q2WEN9 425 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 GUSBP11Q6P575 273 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 OR2V1Q8NHB1 315 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 SCGB1C1Q8TD33 95 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 SPSB4Q96A44 273 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 RAB40CQ96S21 281 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 RNF150Q9ULK6 438 aa10.14□□□□□ -0.79
VIPAS39-211ENST00000557658 A0A1W2PQM1 296 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms