RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 AUP1Q9Y679 476 aa11.64□□□□□ -0.55
SUPT16H-208ENST00000557652 A3GALT2U3KPV4 340 aa11.64□□□□□ -0.55
SUPT16H-208ENST00000557652 A0A075B6Q4 140 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 TRBV6-6A0A0A6YYG2 114 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 PAHP00439 452 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 TFF1P04155 84 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 GSTP1P09211 210 aaKnown RBP11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 ZNF728P0DKX0 622 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 MRPS15P82914 257 aaKnown RBP11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 PITPNAQ00169 270 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 AESQ08117 197 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 EDDM3AQ14507 147 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 ATXN7L3Q14CW9 347 aaPredicted RBP11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 SPCS2Q15005 226 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 PNLIPRP3Q17RR3 467 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 C6orf183Q5T699 404 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 NCR3LG1Q68D85 454 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 TMEM200BQ69YZ2 307 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 FAM185AQ8N0U4 392 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 UPRTQ96BW1 309 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 COQ2Q96H96 371 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 WDFY2Q96P53 400 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 NICN1Q9BSH3 213 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 TMPRSS13Q9BYE2 586 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 ATG5Q9H1Y0 275 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 LINC00574Q9H8X3 128 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 C19orf12Q9NSK7 152 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 ADAM30Q9UKF2 790 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 CDC42EP3Q9UKI2 254 aa11.63□□□□□ -0.55
SUPT16H-208ENST00000557652 MEIKINA0A087WXM9 373 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 A0A0A6YYD4 124 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 A0A0B4J203 849 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 C17orf98A8MV24 154 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 SOCS1O15524 211 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 ORC5O43913 435 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 MT-ND4P03905 459 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 HIST1H1DP16402 221 aaKnown RBP11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 PRTN3P24158 256 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 TMEM50BP56557 158 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 GUCA2AQ02747 115 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 NKAPLQ5M9Q1 402 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 OR52W1Q6IF63 320 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 FAHD2BQ6P2I3 314 aaPredicted RBP11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 SAMD12Q8N8I0 201 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 NANPQ8TBE9 248 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 C15orf40Q8WUR7 153 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 FAHD2AQ96GK7 314 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 SIRPDQ9H106 197 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 KCNK15Q9H427 330 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 C12orf4Q9NQ89 552 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 KIF25Q9UIL4 384 aa11.62□□□□□ -0.55
SUPT16H-208ENST00000557652 MFNGO00587 321 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 HSPB6O14558 160 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 XRCC3O43542 346 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 TOX4O94842 621 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 NAPSAO96009 420 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 MMP9P14780 707 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 GLIPR1P48060 266 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 EFNB2P52799 333 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 ERVFRD-1P60508 538 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 SRSF7Q16629 238 aaKnown RBP eCLIP11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 Q3ZCU0 254 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 HEPN1Q6WQI6 88 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 C6orf201Q7Z4U5 140 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 TRAPPC6BQ86SZ2 158 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 FGFRL1Q8N441 504 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 BPIFB2Q8N4F0 458 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 OR4M1Q8NGD0 313 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 OR5H6Q8NGV6 325 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 PLPPR1Q8TBJ4 325 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 SLC25A38Q96DW6 304 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 ARHGAP5-AS1Q96IT6 56 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 SULT4A1Q9BR01 284 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 PECRQ9BY49 303 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 HEXA-AS1Q9H8Q6 139 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 MBNL3Q9NUK0 354 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 KCNIP1Q9NZI2 227 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 ONECUT1Q9UBC0 465 aa11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 TEP1Q99973 2627 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-208ENST00000557652 KBTBD11-OT1A0A1B0GTJ5 212 aa11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 DPPA5A6NC42 116 aa11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 CLPXO76031 633 aa11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 DIRAS3O95661 229 aa11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 CD3GP09693 182 aa11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 CGB3P0DN86 165 aa11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 CGB7P0DN87 165 aa11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 DLX6P56179 175 aa11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 ARF6P62330 175 aa11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 OR52M1Q8NGK5 317 aa11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 CMSS1Q9BQ75 279 aaKnown RBP11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 FAAP24Q9BTP7 215 aa11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 NXF2Q9GZY0 626 aaKnown RBP11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 MMP27Q9H306 513 aa11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 COMMD3Q9UBI1 195 aa11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 TRAPPC2LQ9UL33 140 aa11.6□□□□□ -0.55
SUPT16H-208ENST00000557652 UBE2QL1A1L167 161 aa11.59□□□□□ -0.55
SUPT16H-208ENST00000557652 NPIPB11E5RHQ5 1161 aa11.59□□□□□ -0.55
SUPT16H-208ENST00000557652 SPINT2O43291 252 aa11.59□□□□□ -0.55
SUPT16H-208ENST00000557652 MELTFP08582 738 aa11.59□□□□□ -0.55
SUPT16H-208ENST00000557652 DTYMKP23919 212 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms