RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SPI1P17947 270 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 PI3P19957 117 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 GCSHP23434 173 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 AZGP1P25311 298 aaKnown RBP4.65□□□□□ -1.67
VPS33B-207ENST00000557470 LMO1P25800 156 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 PRDX2P32119 198 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 RASSF2P50749 326 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 BCAP31P51572 246 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 OR12D2P58182 307 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 SMIM11AP58511 58 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 RAB14P61106 215 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 GNG3P63215 75 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 SLC34A1Q06495 639 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 TSPAN31Q12999 210 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 CRMP1Q14194 572 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 RGS21Q2M5E4 152 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 SMIM21Q3B7S5 101 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 CCDC58Q4VC31 144 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 CASC10Q5T4H9 136 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 GPR141Q7Z602 305 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 ARHGAP24Q8N264 748 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF561Q8N587 486 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 OR11H6Q8NGC7 330 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 OR4X2Q8NGF9 303 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 OR52L1Q8NGH7 329 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 OR8D4Q8NGM9 314 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 OR13D1Q8NGV5 346 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 OR2T27Q8NH04 317 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 TEX47Q8TBZ9 253 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 AQP3Q92482 292 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF488Q96MN9 340 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 LYSTQ99698 3801 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 KCTD14Q9BQ13 255 aaPredicted RBP4.65□□□□□ -1.67
VPS33B-207ENST00000557470 KRTAP4-2Q9BYR5 136 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 NMNAT2Q9BZQ4 307 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 DCLRE1BQ9H816 532 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 CHMP1AQ9HD42 196 aaPredicted RBP4.65□□□□□ -1.67
VPS33B-207ENST00000557470 DCAF13Q9NV06 445 aaKnown RBP4.65□□□□□ -1.67
VPS33B-207ENST00000557470 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.65□□□□□ -1.67
VPS33B-207ENST00000557470 CDH10Q9Y6N8 788 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 V9GYQ6 96 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 DNAH7Q8WXX0 4024 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 FAM172BPA6NC97 362 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 K7EQM0 130 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 SLC22A2O15244 555 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 TRIAP1O43715 76 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 GATCO43716 136 aaKnown RBP4.64□□□□□ -1.67
VPS33B-207ENST00000557470 RBP4P02753 201 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF728P0DKX0 622 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 IGHV1-8P0DP01 117 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 HOXA5P20719 270 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 CD24P25063 80 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 PTBP1P26599 531 aaKnown RBP eCLIP4.64□□□□□ -1.67
VPS33B-207ENST00000557470 BMI1P35226 326 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 IFNGR2P38484 337 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 THBS3P49746 956 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 NUDT2P50583 147 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 ARHGDIBP52566 201 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 DGCR2P98153 550 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 CEACAM21Q3KPI0 293 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 ABCA11PQ4W5N1 156 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 KLHL22Q53GT1 634 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 C6orf141Q5SZD1 244 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 LINC01590Q5TEZ4 76 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 SLX4IPQ5VYV7 408 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF770Q6IQ21 691 aaPredicted RBP4.64□□□□□ -1.67
VPS33B-207ENST00000557470 LCN8Q6JVE9 175 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 RPL13AP3Q6NVV1 102 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 C8orf82Q6P1X6 216 aaPredicted RBP4.64□□□□□ -1.67
VPS33B-207ENST00000557470 HAGHLQ6PII5 290 aaPredicted RBP4.64□□□□□ -1.67
VPS33B-207ENST00000557470 C18orf65Q6ZTR6 163 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 TCF23Q7RTU1 214 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 CALHM1Q8IU99 346 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 ERI1Q8IV48 349 aaKnown RBP4.64□□□□□ -1.67
VPS33B-207ENST00000557470 POC1AQ8NBT0 407 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 OR9Q2Q8NGE9 314 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 OR8B12Q8NGG6 310 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 OR52B4Q8NGK2 314 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 OR6N2Q8NGY6 317 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 OR14K1Q8NGZ2 314 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 MUC7Q8TAX7 377 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 NDNFQ8TB73 568 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 GNPDA2Q8TDQ7 276 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 HARBI1Q96MB7 349 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 MS4A10Q96PG2 267 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 OR8B4Q96RC9 309 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 GPHA2Q96T91 129 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF649Q9BS31 505 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 BTBD10Q9BSF8 475 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 MCRIP2Q9BUT9 160 aaKnown RBP4.64□□□□□ -1.67
VPS33B-207ENST00000557470 PKIBQ9C010 78 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 MED20Q9H944 212 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 RASL12Q9NYN1 266 aa4.64□□□□□ -1.67
VPS33B-207ENST00000557470 SAMD4AQ9UPU9 718 aaKnown RBP4.64□□□□□ -1.67
VPS33B-207ENST00000557470 LSM4Q9Y4Z0 139 aaKnown RBP4.64□□□□□ -1.67
VPS33B-207ENST00000557470 DYNC2H1Q8NCM8 4307 aaKnown RBP4.63□□□□□ -1.67
VPS33B-207ENST00000557470 A0A075B6Q4 140 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 IGHV2-26A0A0B4J1V2 119 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 FUOMA2VDF0 154 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 ACOD1A6NK06 481 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms