RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 OR4A4PQ8NGN8 299 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 OR13C8Q8NGS7 320 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 ZNF701Q9NV72 531 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-229ENST00000557348 TREM2Q9NZC2 230 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 FAM215AQ9Y5M1 114 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 TNRC6AQ8NDV7 1962 aaKnown RBP10.82□□□□□ -0.68
SHMT2-229ENST00000557348 LRP5LA4QPB2 252 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 WISP2O76076 250 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 SFTPBP07988 381 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 FPR2P25090 351 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 NPBWR1P48145 328 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 SNRPEP62304 92 aaKnown RBP10.82□□□□□ -0.68
SHMT2-229ENST00000557348 RBPJQ06330 500 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 TMEM211Q6ICI0 200 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 SEM1Q6ZVN7 128 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 TMED4Q7Z7H5 227 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 CALHM1Q8IU99 346 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 OR10AD1Q8NGE0 317 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 OR1J1Q8NGS3 322 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 GTF3AQ92664 365 aaKnown RBP10.82□□□□□ -0.68
SHMT2-229ENST00000557348 ST6GALNAC5Q9BVH7 336 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 RIMS4Q9H426 269 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-229ENST00000557348 CYTL1Q9NRR1 136 aa10.82□□□□□ -0.68
SHMT2-229ENST00000557348 TRAV20A0A0B4J274 112 aa10.81□□□□□ -0.68
SHMT2-229ENST00000557348 ZNF705EA8MWA4 302 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-229ENST00000557348 AP4M1O00189 453 aa10.81□□□□□ -0.68
SHMT2-229ENST00000557348 GEMIN2O14893 280 aaKnown RBP10.81□□□□□ -0.68
SHMT2-229ENST00000557348 IFNA17P01571 189 aa10.81□□□□□ -0.68
SHMT2-229ENST00000557348 PMP2P02689 132 aa10.81□□□□□ -0.68
SHMT2-229ENST00000557348 CSN2P05814 226 aa10.81□□□□□ -0.68
SHMT2-229ENST00000557348 FCGR3AP08637 254 aa10.81□□□□□ -0.68
SHMT2-229ENST00000557348 PRSS12P56730 875 aa10.81□□□□□ -0.68
SHMT2-229ENST00000557348 RAB2AP61019 212 aa10.81□□□□□ -0.68
SHMT2-229ENST00000557348 TMEM128Q5BJH2 165 aa10.81□□□□□ -0.68
SHMT2-229ENST00000557348 OR2T2Q6IF00 324 aa10.81□□□□□ -0.68
SHMT2-229ENST00000557348 OPN3Q9H1Y3 402 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-229ENST00000557348 ZNF286AQ9HBT8 521 aa10.81□□□□□ -0.68
SHMT2-229ENST00000557348 NECAP2Q9NVZ3 263 aa10.81□□□□□ -0.68
SHMT2-229ENST00000557348 FREM1Q5H8C1 2179 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 A0A1B0GW64 132 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 K7EM74 188 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 JTBO76095 146 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 IFNA10P01566 189 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 PGAM2P15259 253 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 GCH1P30793 250 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 TDGF1P3P51864 188 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 MST1LQ2TV78 715 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 PIGYQ3MUY2 71 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 ZNF718Q3SXZ3 478 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 FIP1L1Q6UN15 594 aaKnown RBP10.8□□□□□ -0.68
SHMT2-229ENST00000557348 Q6ZS49 121 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 BHLHE23Q8NDY6 225 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 SLC25A40Q8TBP6 338 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 DCUN1D4Q92564 292 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 HIST1H2BAQ96A08 127 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 MUCL1Q96DR8 90 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 OR2J1Q9GZK6 312 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 ZNF442Q9H7R0 627 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 EHFQ9NZC4 300 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 MIOXQ9UGB7 285 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 AK3Q9UIJ7 227 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 ANXA10Q9UJ72 324 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 SLC25A15Q9Y619 301 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 MED12LQ86YW9 2145 aa10.8□□□□□ -0.68
SHMT2-229ENST00000557348 TPRP12270 2363 aaKnown RBP10.8□□□□□ -0.68
SHMT2-229ENST00000557348 OR7C1O76099 320 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-229ENST00000557348 CELA3BP08861 270 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 SFTA3P0C7M3 94 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 CECR9P0C854 216 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 ZNF44P15621 663 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 KITLGP21583 273 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 CA6P23280 308 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 RBM39Q14498 530 aaKnown RBP10.79□□□□□ -0.68
SHMT2-229ENST00000557348 MBNL2Q5VZF2 373 aaKnown RBP10.79□□□□□ -0.68
SHMT2-229ENST00000557348 BTNL8Q6UX41 500 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 MRGPRGQ86SM5 289 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 PEG10Q86TG7 708 aaKnown RBP10.79□□□□□ -0.68
SHMT2-229ENST00000557348 LHFPL1Q86WI0 220 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 STX12Q86Y82 276 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 LFNGQ8NES3 379 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 OR8G5Q8NG78 346 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 SLAMF9Q96A28 289 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 ADAT1Q9BUB4 502 aaKnown RBP10.79□□□□□ -0.68
SHMT2-229ENST00000557348 CNTNAP3Q9BZ76 1288 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 OR51I2Q9H344 312 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 UNKLQ9H9P5 680 aaKnown RBP10.79□□□□□ -0.68
SHMT2-229ENST00000557348 ZNF230Q9UIE0 474 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-229ENST00000557348 VSIG4Q9Y279 399 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 ACACBO00763 2458 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 H7C1Q1 480 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 TGOLN2O43493 480 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 BCL3P20749 454 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 ARHGDIBP52566 201 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 RAB4BP61018 213 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 RPS23P62266 143 aaKnown RBP10.79□□□□□ -0.68
SHMT2-229ENST00000557348 PPP1R1AQ13522 171 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 OR8G1Q15617 311 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 GFRALQ6UXV0 394 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 KLF14Q8TD94 323 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-229ENST00000557348 EXTL1Q92935 676 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms