RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 ACBD7Q8N6N7 88 aa14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 CNIH3Q8TBE1 160 aa14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 PLPPR1Q8TBJ4 325 aa14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 HAVCR2Q8TDQ0 301 aa14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 MRGPRDQ8TDS7 321 aa14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 TFAP2CQ92754 450 aa14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 CENPNQ96H22 339 aaPredicted RBP14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 RAX2Q96IS3 184 aa14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 SAC3D1A6NKF1 404 aa14.4□□□□□ -0.1
VIPAS39-209ENST00000556909 HSD17B6O14756 317 aa14.4□□□□□ -0.1
VIPAS39-209ENST00000556909 IL13RA2Q14627 380 aa14.4□□□□□ -0.1
VIPAS39-209ENST00000556909 SLC25A30Q5SVS4 291 aa14.4□□□□□ -0.1
VIPAS39-209ENST00000556909 SERPINA12Q8IW75 414 aa14.4□□□□□ -0.1
VIPAS39-209ENST00000556909 PARP16Q8N5Y8 322 aa14.4□□□□□ -0.1
VIPAS39-209ENST00000556909 PXT1Q8NFP0 134 aa14.4□□□□□ -0.1
VIPAS39-209ENST00000556909 OR5D14Q8NGL3 314 aa14.4□□□□□ -0.1
VIPAS39-209ENST00000556909 OR10X1Q8NGY0 326 aa14.4□□□□□ -0.1
VIPAS39-209ENST00000556909 RFESDQ8TAC1 157 aa14.4□□□□□ -0.1
VIPAS39-209ENST00000556909 BARHL1Q9BZE3 327 aa14.4□□□□□ -0.1
VIPAS39-209ENST00000556909 ZMAT5Q9UDW3 170 aaKnown RBP14.4□□□□□ -0.1
VIPAS39-209ENST00000556909 A0A1W2PPE3 182 aa14.39□□□□□ -0.11
VIPAS39-209ENST00000556909 LINC01548A6NM66 108 aa14.39□□□□□ -0.11
VIPAS39-209ENST00000556909 RAB25P57735 213 aa14.39□□□□□ -0.11
VIPAS39-209ENST00000556909 SNRPGP62308 76 aaKnown RBP14.39□□□□□ -0.11
VIPAS39-209ENST00000556909 ZNF816Q0VGE8 651 aaPredicted RBP14.39□□□□□ -0.11
VIPAS39-209ENST00000556909 PIGYQ3MUY2 71 aa14.39□□□□□ -0.11
VIPAS39-209ENST00000556909 C1orf146Q5VVC0 180 aa14.39□□□□□ -0.11
VIPAS39-209ENST00000556909 OR10A7Q8NGE5 316 aa14.39□□□□□ -0.11
VIPAS39-209ENST00000556909 ALG8Q9BVK2 526 aa14.39□□□□□ -0.11
VIPAS39-209ENST00000556909 EXOGQ9Y2C4 368 aaKnown RBP14.39□□□□□ -0.11
VIPAS39-209ENST00000556909 TRAV39A0A0B4J263 110 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 IGHV1-3A0A0C4DH29 117 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 CCL24O00175 119 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 GABRPO00591 440 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 ZFPL1O95159 310 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 RPLP1P05386 114 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 GPR12P47775 334 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 REG1BP48304 166 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 KCNJ3P48549 501 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 LUMP51884 338 aaPredicted RBP14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 EBI3Q14213 229 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 DEFB136Q30KP8 78 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 MEDAGQ5VYS4 303 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 TEX38Q6PEX7 206 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 SLC16A12Q6ZSM3 486 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 IZUMO1Q8IYV9 350 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 OR10K1Q8NGX5 313 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 LGALS12Q96DT0 336 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 ISG20L2Q9H9L3 353 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 ZNF581Q9P0T4 197 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 U3KQK5 164 aa14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 HUWE1Q7Z6Z7 4374 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-209ENST00000556909 IGHV3-72A0A0B4J1Y9 119 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 TMEM212A6NML5 194 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 AP4M1O00189 453 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 CCRL2O00421 344 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 RAMP3O60896 148 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 ALPLP05186 524 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 NHLRC4P0CG21 123 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 GP2P55259 537 aaKnown RBP14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 GALEQ14376 348 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 LHFPL3Q86UP9 236 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 TGIF2LXQ8IUE1 241 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 Q8N6K4 173 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 OR51A2Q8NGJ7 313 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 TNFAIP8L1Q8WVP5 186 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 TSEN15Q8WW01 171 aaKnown RBP14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 CPNE2Q96FN4 548 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 MRPL48Q96GC5 212 aaKnown RBP14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 EAF1Q96JC9 268 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 PDCD1LG2Q9BQ51 273 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 FAM192AQ9GZU8 254 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 ABCG5Q9H222 651 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 DCLRE1BQ9H816 532 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 LIN7CQ9NUP9 197 aaKnown RBP14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 DHDHQ9UQ10 334 aa14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 LSM4Q9Y4Z0 139 aaKnown RBP14.37□□□□□ -0.11
VIPAS39-209ENST00000556909 RSU1Q15404 277 aa14.36□□□□□ -0.11
VIPAS39-209ENST00000556909 NKAPLQ5M9Q1 402 aa14.36□□□□□ -0.11
VIPAS39-209ENST00000556909 ZNF529Q6P280 563 aa14.36□□□□□ -0.11
VIPAS39-209ENST00000556909 LCNL1Q6ZST4 164 aa14.36□□□□□ -0.11
VIPAS39-209ENST00000556909 MOB3BQ86TA1 216 aa14.36□□□□□ -0.11
VIPAS39-209ENST00000556909 SYS1Q8N2H4 156 aa14.36□□□□□ -0.11
VIPAS39-209ENST00000556909 SUMF2Q8NBJ7 301 aa14.36□□□□□ -0.11
VIPAS39-209ENST00000556909 Q8NFD4 153 aa14.36□□□□□ -0.11
VIPAS39-209ENST00000556909 OR8U1Q8NH10 309 aa14.36□□□□□ -0.11
VIPAS39-209ENST00000556909 OR5AK2Q8NH90 309 aa14.36□□□□□ -0.11
VIPAS39-209ENST00000556909 PRR25Q96S07 402 aa14.36□□□□□ -0.11
VIPAS39-209ENST00000556909 GPER1Q99527 375 aa14.36□□□□□ -0.11
VIPAS39-209ENST00000556909 DPCDQ9BVM2 203 aaPredicted RBP14.36□□□□□ -0.11
VIPAS39-209ENST00000556909 AASSQ9UDR5 926 aa14.36□□□□□ -0.11
VIPAS39-209ENST00000556909 DYNC2H1Q8NCM8 4307 aaKnown RBP14.35□□□□□ -0.11
VIPAS39-209ENST00000556909 SNTNA6NMZ2 147 aa14.35□□□□□ -0.11
VIPAS39-209ENST00000556909 NCBP2LA6PVI3 153 aaKnown RBP14.35□□□□□ -0.11
VIPAS39-209ENST00000556909 E9PI62 339 aa14.35□□□□□ -0.11
VIPAS39-209ENST00000556909 GAPDHP04406 335 aaKnown RBP14.35□□□□□ -0.11
VIPAS39-209ENST00000556909 RPSAP08865 295 aaKnown RBP14.35□□□□□ -0.11
VIPAS39-209ENST00000556909 RAB3AP20336 220 aa14.35□□□□□ -0.11
VIPAS39-209ENST00000556909 GPR50Q13585 617 aa14.35□□□□□ -0.11
VIPAS39-209ENST00000556909 PNLIPRP3Q17RR3 467 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms