RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 TMEM268Q5VZI3 342 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 CCDC36Q8IYA8 594 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 LGI3Q8N145 548 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 RBMXL3Q8N7X1 1067 aaKnown RBP8.58□□□□□ -1.04
TMEM260-211ENST00000556648 LILRB1Q8NHL6 650 aaPredicted RBP8.58□□□□□ -1.04
TMEM260-211ENST00000556648 GTF3AQ92664 365 aaKnown RBP8.58□□□□□ -1.04
TMEM260-211ENST00000556648 ERGIC1Q969X5 290 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 SPACA1Q9HBV2 294 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 ZC4H2Q9NQZ6 224 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 ZNF71Q9NQZ8 489 aaPredicted RBP8.58□□□□□ -1.04
TMEM260-211ENST00000556648 PLSCR4Q9NRQ2 329 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 PLA2G2EQ9NZK7 142 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 FBXL17Q9UF56 701 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 PURGQ9UJV8 347 aaKnown RBP8.58□□□□□ -1.04
TMEM260-211ENST00000556648 PROCRQ9UNN8 238 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 FAM215AQ9Y5M1 114 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 KIR2DS1A0A191URI9 304 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 AHRRA9YTQ3 701 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 GPR31O00270 319 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 NXPH2O95156 264 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 CNOT4O95628 575 aaKnown RBP8.57□□□□□ -1.04
TMEM260-211ENST00000556648 KIR2DS4P43632 304 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 NAAAQ02083 359 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 KIR2DS1Q14954 304 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 MSMPQ1L6U9 139 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 TUSC1Q2TAM9 212 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 ZNF324BQ6AW86 544 aaPredicted RBP8.57□□□□□ -1.04
TMEM260-211ENST00000556648 ALKBH2Q6NS38 261 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 C11orf53Q8IXP5 236 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 ZNF565Q8N9K5 539 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.57□□□□□ -1.04
TMEM260-211ENST00000556648 C1orf162Q8NEQ5 155 aaPredicted RBP8.57□□□□□ -1.04
TMEM260-211ENST00000556648 SYT3Q9BQG1 590 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 PARP12Q9H0J9 701 aaKnown RBP8.57□□□□□ -1.04
TMEM260-211ENST00000556648 IFT22Q9H7X7 185 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 MSL2Q9HCI7 577 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 OBP2BQ9NPH6 170 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 PCDHB10Q9UN67 800 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 RCL1Q9Y2P8 373 aaKnown RBP8.57□□□□□ -1.04
TMEM260-211ENST00000556648 SESN1Q9Y6P5 492 aa8.57□□□□□ -1.04
TMEM260-211ENST00000556648 ARID1AO14497 2285 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 IGHV2OR16-5A0A0B4J2B6 119 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 MBD3L4A6NDZ8 208 aaPredicted RBP8.56□□□□□ -1.04
TMEM260-211ENST00000556648 MBD3L3A6NE82 208 aaPredicted RBP8.56□□□□□ -1.04
TMEM260-211ENST00000556648 MBD3L5A6NJ08 208 aaPredicted RBP8.56□□□□□ -1.04
TMEM260-211ENST00000556648 ZSCAN5BA6NJL1 495 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 FGF16O43320 207 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 TPD52L2O43399 206 aaKnown RBP8.56□□□□□ -1.04
TMEM260-211ENST00000556648 RND3P61587 244 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 SMCO1Q147U7 214 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 Q6ZS92 163 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 BHLHA15Q7RTS1 189 aaPredicted RBP8.56□□□□□ -1.04
TMEM260-211ENST00000556648 H1FOOQ8IZA3 346 aaPredicted RBP8.56□□□□□ -1.04
TMEM260-211ENST00000556648 SELENOHQ8IZQ5 122 aaKnown RBP8.56□□□□□ -1.04
TMEM260-211ENST00000556648 PRR18Q8N4B5 295 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 OR4D5Q8NGN0 318 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 MBD3L2Q8NHZ7 208 aaPredicted RBP8.56□□□□□ -1.04
TMEM260-211ENST00000556648 IL1F10Q8WWZ1 152 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 CABLES2Q9BTV7 478 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 TMEM222Q9H0R3 208 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 OR14J1Q9UGF5 321 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 POLDIP2Q9Y2S7 368 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 UBE2J1Q9Y385 318 aaPredicted RBP8.56□□□□□ -1.04
TMEM260-211ENST00000556648 INTS1Q8N201 2190 aaKnown RBP8.56□□□□□ -1.04
TMEM260-211ENST00000556648 AKAP13Q12802 2813 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 TIMM8AO60220 97 aaPredicted RBP8.56□□□□□ -1.04
TMEM260-211ENST00000556648 NXPH3O95157 252 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 IGLV1-44P01699 117 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 FAM157CP0CG43 387 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 FABP6P51161 128 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 MST1LQ2TV78 715 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 FAM53AQ6NSI3 398 aaPredicted RBP8.56□□□□□ -1.04
TMEM260-211ENST00000556648 IGFL3Q6UXB1 125 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 ZNF497Q6ZNH5 498 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 ASCL5Q7RTU5 278 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 EIF4E3Q8N5X7 224 aaKnown RBP8.56□□□□□ -1.04
TMEM260-211ENST00000556648 BPIFCQ8NFQ6 507 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 DMBX1Q8NFW5 382 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 OR8G5Q8NG78 346 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 OR4A4PQ8NGN8 299 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 BOD1Q96IK1 185 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 WFDC1Q9HC57 220 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 UFSP2Q9NUQ7 469 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 TMEM100Q9NV29 134 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 TAS2R3Q9NYW6 316 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 FBXO9Q9UK97 447 aaPredicted RBP8.56□□□□□ -1.04
TMEM260-211ENST00000556648 CACNA1GO43497 2377 aa8.56□□□□□ -1.04
TMEM260-211ENST00000556648 ZNF292O60281 2723 aa8.55□□□□□ -1.04
TMEM260-211ENST00000556648 PSPNO60542 156 aa8.55□□□□□ -1.04
TMEM260-211ENST00000556648 HAND1O96004 215 aa8.55□□□□□ -1.04
TMEM260-211ENST00000556648 GLAP06280 429 aa8.55□□□□□ -1.04
TMEM260-211ENST00000556648 HOXB1P14653 301 aaPredicted RBP8.55□□□□□ -1.04
TMEM260-211ENST00000556648 TMEM33P57088 247 aa8.55□□□□□ -1.04
TMEM260-211ENST00000556648 C1QTNF12Q5T7M4 302 aa8.55□□□□□ -1.04
TMEM260-211ENST00000556648 ZNF474Q6S9Z5 364 aaPredicted RBP8.55□□□□□ -1.04
TMEM260-211ENST00000556648 FAM185AQ8N0U4 392 aa8.55□□□□□ -1.04
TMEM260-211ENST00000556648 LRFN3Q9BTN0 628 aa8.55□□□□□ -1.04
TMEM260-211ENST00000556648 RIMS4Q9H426 269 aaPredicted RBP8.55□□□□□ -1.04
TMEM260-211ENST00000556648 HES4Q9HCC6 221 aa8.55□□□□□ -1.04
TMEM260-211ENST00000556648 NUP50Q9UKX7 468 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms