RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 ATRNO75882 1429 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 PTPRKQ15262 1439 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 ADGRL1O94910 1474 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 ARHGEF11O15085 1522 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 BICRAQ9NZM4 1560 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 IGHV2-26A0A0B4J1V2 119 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 CD300LBA8K4G0 201 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 CEACAM18A8MTB9 384 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 C9JQL5 133 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 ISLRO14498 428 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 SLC31A1O15431 190 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 ATP8B1O43520 1251 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 TCF21O43680 179 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 ZNF3P17036 446 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 PVALBP20472 110 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-221ENST00000556534 SLC6A1P30531 599 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 MPIP34949 423 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 TGM4P49221 684 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 FAM3AP98173 230 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 TAF9Q16594 264 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 C4orf26Q17RF5 130 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 KRTAP6-3Q3LI67 103 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 CDKL4Q5MAI5 379 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 SDHAF4Q5VUM1 108 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 TBPL2Q6SJ96 375 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 DRAM2Q6UX65 266 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 CASP12Q6UXS9 341 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 C16orf47Q6ZP98 133 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-221ENST00000556534 FAM19A3Q7Z5A8 133 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 SLC25A45Q8N413 288 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 RIBC1Q8N443 379 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-221ENST00000556534 C2orf73Q8N5S3 287 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-221ENST00000556534 TMEM156Q8N614 296 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 ZFP62Q8NB50 900 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-221ENST00000556534 C1orf64Q8NEQ6 169 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 PPP1R36Q96LQ0 422 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 MBOAT7Q96N66 472 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 THTPAQ9BU02 230 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 EBPLQ9BY08 206 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 API5Q9BZZ5 524 aaKnown RBP2.05□□□□□ -2.08
SCFD1-221ENST00000556534 FAM60AQ9NP50 221 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 UBAP1Q9NZ09 502 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 ZNF391Q9UJN7 358 aa2.05□□□□□ -2.08
SCFD1-221ENST00000556534 POLR3AO14802 1390 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-221ENST00000556534 IZUMO1RA6ND01 250 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 GOLGA8KD6RF30 607 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 F5H5K5 113 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 GOLGA8MH3BSY2 632 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 PHYHO14832 338 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 LIN7AO14910 233 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-221ENST00000556534 E2F6O75461 281 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 PSIP1O75475 530 aaKnown RBP2.04□□□□□ -2.08
SCFD1-221ENST00000556534 CXorf1O96002 111 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 ASS1P00966 412 aaKnown RBP2.04□□□□□ -2.08
SCFD1-221ENST00000556534 IGHV1-46P01743 117 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 P0C880 135 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 HLA-DMAP28067 261 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 GRPRP30550 384 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 RAB25P57735 213 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 RBX1P62877 108 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 TBC1D28Q2M2D7 210 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 SPIN3Q5JUX0 258 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 NXNL2Q5VZ03 156 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 TMEM215Q68D42 235 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 FAM151BQ6UXP7 276 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 NT5DC3Q86UY8 548 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 TWIST2Q8WVJ9 160 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 ARAP3Q8WWN8 1544 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 PPWD1Q96BP3 646 aaKnown RBP2.04□□□□□ -2.08
SCFD1-221ENST00000556534 ANAPC13Q9BS18 74 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 UGT2B28Q9BY64 529 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 ULBP1Q9BZM6 244 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 PLEKHJ1Q9NW61 149 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 NKIRAS1Q9NYS0 192 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 IL37Q9NZH6 218 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 COMMD9Q9P000 198 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 MYO5BQ9ULV0 1848 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 C14orf166Q9Y224 244 aaKnown RBP2.04□□□□□ -2.08
SCFD1-221ENST00000556534 BTRCQ9Y297 605 aa2.04□□□□□ -2.08
SCFD1-221ENST00000556534 KMT2EQ8IZD2 1858 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 IGKV2-24A0A0C4DH68 120 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 TMEM250H0YL14 139 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 ATP6V1G2O95670 118 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 HLA-AP01891 365 aaKnown RBP2.03□□□□□ -2.08
SCFD1-221ENST00000556534 SCGB1C2P0DMR2 95 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 PSKH1P11801 424 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 CNTFRP26992 372 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 CDC34P49427 236 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-221ENST00000556534 UBE2IP63279 158 aaKnown RBP2.03□□□□□ -2.08
SCFD1-221ENST00000556534 FAM53BQ14153 422 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 LRRC26Q2I0M4 334 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 FAM131AQ6UXB0 335 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 OR8S1Q8NH09 359 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 SCGB1C1Q8TD33 95 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 MAL2Q969L2 176 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 PEBP4Q96S96 227 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 CHST5Q9GZS9 411 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 DRC3Q9H069 523 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 DMAC2Q9NW81 257 aa2.03□□□□□ -2.08
SCFD1-221ENST00000556534 POMPQ9Y244 141 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms