RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 H2AFY2Q9P0M6 372 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-219ENST00000556432 IGKV1-12A0A0C4DH73 117 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 KDM4BO94953 1096 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 IGKV1D-12P01611 117 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 ATF1P18846 271 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 SSTR5P35346 364 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 SLURP1P55000 103 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 RUNX1Q01196 453 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 Q6P435 159 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 DHFR2Q86XF0 187 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 ZNF491Q8N8L2 437 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 MYOZ3Q8TDC0 251 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 EME1Q96AY2 570 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 C10orf35Q96D05 121 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 ADAT3Q96EY9 351 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-219ENST00000556432 OPALINQ96PE5 141 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 SPACA5Q96QH8 159 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 OR4C12Q96R67 309 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 OR51J1Q9H342 316 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 ADGRL4Q9HBW9 690 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 SLC25A19Q9HC21 320 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 NDE1Q9NXR1 346 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 ZNF107Q9UII5 783 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-219ENST00000556432 WSB1Q9Y6I7 421 aa10.79□□□□□ -0.68
ACTN1-219ENST00000556432 IGKV1-9A0A0C4DH69 117 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 H0YJX3 145 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 M0R129 80 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 OR8U9P0C7N5 309 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 RAP2AP10114 183 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 SLC2A2P11168 524 aaPredicted RBP10.78□□□□□ -0.68
ACTN1-219ENST00000556432 HTR1FP30939 366 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 PITPNAQ00169 270 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 SSX6Q7RTT6 188 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 TMEM179BQ7Z7N9 219 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 HS3ST5Q8IZT8 346 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 RDH10Q8IZV5 341 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 OR8H1Q8NGG4 311 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 OR51T1Q8NGJ9 327 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 IL17DQ8TAD2 202 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 SPSB1Q96BD6 273 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 NR1H4Q96RI1 486 aaPredicted RBP10.78□□□□□ -0.68
ACTN1-219ENST00000556432 BARHL1Q9BZE3 327 aa10.78□□□□□ -0.68
ACTN1-219ENST00000556432 ALX4Q9H161 411 aaPredicted RBP10.78□□□□□ -0.68
ACTN1-219ENST00000556432 TRAV39A0A0B4J263 110 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 LINC01619G3V211 115 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 G3V318 75 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 PRKYO43930 277 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 IGF1P05019 195 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 UBCP0CG48 685 aaKnown RBP10.77□□□□□ -0.69
ACTN1-219ENST00000556432 CGB3P0DN86 165 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 CGB7P0DN87 165 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 ARSBP15848 533 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 PRKACGP22612 351 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 IL3RAP26951 378 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 CD1BP29016 333 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 F2RL1P55085 397 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 SLC16A12Q6ZSM3 486 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 HAPLN4Q86UW8 402 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 LYPD6Q86Y78 171 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 FAM71E2Q8N5Q1 922 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 FGGYQ96C11 551 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 RSRP1Q9BUV0 290 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 PRRG3Q9BZD7 231 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 PARP11Q9NR21 331 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 PLSCR3Q9NRY6 295 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 FAM118AQ9NWS6 357 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 TAGLN3Q9UI15 199 aa10.77□□□□□ -0.69
ACTN1-219ENST00000556432 METTL15A6NJ78 407 aa10.76□□□□□ -0.69
ACTN1-219ENST00000556432 ZNF736B4DX44 427 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-219ENST00000556432 TMEM225BP0DP42 221 aa10.76□□□□□ -0.69
ACTN1-219ENST00000556432 KIAA0141Q14154 515 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-219ENST00000556432 ACSM6Q6P461 480 aa10.76□□□□□ -0.69
ACTN1-219ENST00000556432 UTS2BQ765I0 119 aa10.76□□□□□ -0.69
ACTN1-219ENST00000556432 PRSS35Q8N3Z0 413 aa10.76□□□□□ -0.69
ACTN1-219ENST00000556432 RTN4IP1Q8WWV3 396 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-219ENST00000556432 RBMXL1Q96E39 390 aaKnown RBP10.76□□□□□ -0.69
ACTN1-219ENST00000556432 LRGUKQ96M69 825 aa10.76□□□□□ -0.69
ACTN1-219ENST00000556432 LINC00574Q9H8X3 128 aa10.76□□□□□ -0.69
ACTN1-219ENST00000556432 RHOFQ9HBH0 211 aa10.76□□□□□ -0.69
ACTN1-219ENST00000556432 C19orf73Q9NVV2 129 aa10.76□□□□□ -0.69
ACTN1-219ENST00000556432 ARL2BPQ9Y2Y0 163 aa10.76□□□□□ -0.69
ACTN1-219ENST00000556432 A0A1W2PQL4 384 aaPredicted RBP10.75□□□□□ -0.69
ACTN1-219ENST00000556432 NPIPB11E5RHQ5 1161 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 SDCBPO00560 298 aaPredicted RBP10.75□□□□□ -0.69
ACTN1-219ENST00000556432 HSPA12AO43301 675 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 SLC25A17O43808 307 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 APOL3O95236 402 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 ANXA8P13928 327 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 RAB9AP51151 201 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 CRISP1P54107 249 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 CDK5R1Q15078 307 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 MMDQ15546 238 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 HAGHQ16775 308 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 FAM220AQ7Z4H9 259 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 ANKRD13BQ86YJ7 626 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 TMEM104Q8NE00 496 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 OR10H4Q8NGA5 316 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 OR10A7Q8NGE5 316 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 OR13C9Q8NGT0 318 aa10.75□□□□□ -0.69
ACTN1-219ENST00000556432 UTP4Q969X6 686 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms