RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 CDNFQ49AH0 187 aa11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 SLC35E4Q6ICL7 350 aa11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 ZNF497Q6ZNH5 498 aa11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 OR13A1Q8NGR1 328 aa11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 DACT3Q96B18 629 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 ZNF714Q96N38 554 aa11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 HDHD3Q9BSH5 251 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 SLIRPQ9GZT3 109 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 ABCG5Q9H222 651 aa11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 OR6C3Q9NZP0 311 aa11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 HSF4Q9ULV5 492 aa11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 AUP1Q9Y679 476 aa11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 LINC00312Q9Y6C7 94 aa11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 CELSR1Q9NYQ6 3014 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 A6NHS1 94 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 CTDSP2O14595 271 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 MT-ND4P03905 459 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 ELK1P19419 428 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 PRB3Q04118 309 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 ARFRP1Q13795 201 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 CR1LQ2VPA4 569 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 TMEM69Q5SWH9 247 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 TCF23Q7RTU1 214 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 ZNF565Q8N9K5 539 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 CMSS1Q9BQ75 279 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 BATF3Q9NR55 127 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 KCNK7Q9Y2U2 307 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 MAST4O15021 2626 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 FLNAP21333 2647 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 TMEM235A6NFC5 223 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 MFNGO00587 321 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 TOX4O94842 621 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 APOA1P02647 267 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 CD3GP09693 182 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 ZNF728P0DKX0 622 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 ERVFRD-1P60508 538 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 LAX1Q8IWV1 398 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 TMPRSS13Q9BYE2 586 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 C12orf4Q9NQ89 552 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 SIRT7Q9NRC8 400 aa11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 ELF5Q9UKW6 265 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 MRPS7Q9Y2R9 242 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-208ENST00000556412 J3QLI3 93 aa11.55□□□□□ -0.56
VIPAS39-208ENST00000556412 CA11O75493 328 aa11.55□□□□□ -0.56
VIPAS39-208ENST00000556412 OMGP23515 440 aa11.55□□□□□ -0.56
VIPAS39-208ENST00000556412 MNDAP41218 407 aa11.55□□□□□ -0.56
VIPAS39-208ENST00000556412 DLX1P56177 255 aa11.55□□□□□ -0.56
VIPAS39-208ENST00000556412 PAX8Q06710 450 aa11.55□□□□□ -0.56
VIPAS39-208ENST00000556412 ZNF782Q6ZMW2 699 aaPredicted RBP11.55□□□□□ -0.56
VIPAS39-208ENST00000556412 IL17RELQ6ZVW7 336 aa11.55□□□□□ -0.56
VIPAS39-208ENST00000556412 PRR18Q8N4B5 295 aa11.55□□□□□ -0.56
VIPAS39-208ENST00000556412 UBALD1Q8TB05 177 aa11.55□□□□□ -0.56
VIPAS39-208ENST00000556412 MRPL30Q8TCC3 161 aaKnown RBP11.55□□□□□ -0.56
VIPAS39-208ENST00000556412 WDFY2Q96P53 400 aa11.55□□□□□ -0.56
VIPAS39-208ENST00000556412 GAL3ST2Q9H3Q3 398 aa11.55□□□□□ -0.56
VIPAS39-208ENST00000556412 UBE2J1Q9Y385 318 aaPredicted RBP11.55□□□□□ -0.56
VIPAS39-208ENST00000556412 A0A0A6YYH2 397 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 hCG_1809904A0A1W2PP81 198 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 A0A1W2PPE2 198 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 A0A1W2PR64 198 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 A0A1W2PRV1 198 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 A6NJ64 397 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 SERPINE3A8MV23 424 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 XRCC3O43542 346 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 RCC1P18754 421 aaPredicted RBP11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 SSTR5P35346 364 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 TALDO1P37837 337 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 GNG2P59768 71 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 ARL6IP1Q15041 203 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 LTC4SQ16873 150 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 PRAMEF5Q5TYX0 476 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 VMO1Q7Z5L0 202 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 PDZD9Q8IXQ8 264 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 KIR3DL3Q8N743 410 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 RFESDQ8TAC1 157 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 CMTM3Q96MX0 182 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 EXTL2Q9UBQ6 330 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 ADAM30Q9UKF2 790 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 KPTNQ9Y664 436 aa11.54□□□□□ -0.56
VIPAS39-208ENST00000556412 IGHV3OR16-10A0A075B7F0 116 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 M0R1W7 72 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 AVPP01185 164 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 PTHLHP12272 177 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 TAS2R20P59543 309 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 PAX5Q02548 391 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 ZNF260Q3ZCT1 412 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 Q8N7P7 452 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 NUDCD2Q8WVJ2 157 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 SIRPDQ9H106 197 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 MIXL1Q9H2W2 232 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 METTL8Q9H825 291 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 CALYQ9NYX4 217 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 KCNIP1Q9NZI2 227 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 OPN4Q9UHM6 478 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 CLPXO76031 633 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 GSTP1P09211 210 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 FAM120AOSQ5T036 256 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 C6orf183Q5T699 404 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 HACD4Q5VWC8 232 aa11.53□□□□□ -0.56
VIPAS39-208ENST00000556412 SNX29P2Q8IUI4 249 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms