RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 MCRIP2Q9BUT9 160 aaKnown RBP6.19□□□□□ -1.42
PTCSC3-201ENST00000556013 METTL9Q9H1A3 318 aa6.19□□□□□ -1.42
PTCSC3-201ENST00000556013 ISG20L2Q9H9L3 353 aaKnown RBP6.19□□□□□ -1.42
PTCSC3-201ENST00000556013 RAB9BQ9NP90 201 aa6.19□□□□□ -1.42
PTCSC3-201ENST00000556013 TMEM138Q9NPI0 162 aa6.19□□□□□ -1.42
PTCSC3-201ENST00000556013 FAM118AQ9NWS6 357 aa6.19□□□□□ -1.42
PTCSC3-201ENST00000556013 AURKAIP1Q9NWT8 199 aaPredicted RBP6.19□□□□□ -1.42
PTCSC3-201ENST00000556013 CALYQ9NYX4 217 aa6.19□□□□□ -1.42
PTCSC3-201ENST00000556013 PSG11Q9UQ72 335 aa6.19□□□□□ -1.42
PTCSC3-201ENST00000556013 MOB4Q9Y3A3 225 aa6.19□□□□□ -1.42
PTCSC3-201ENST00000556013 HSPE1-MOB4S4R3N1 261 aa6.19□□□□□ -1.42
PTCSC3-201ENST00000556013 PSMB11A5LHX3 300 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 OGG1O15527 345 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 RRP9O43818 475 aaKnown RBP6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 IGHG2P01859 326 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 CSTBP04080 98 aaKnown RBP6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 GAPDHP04406 335 aaKnown RBP6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 CD24P25063 80 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 NFYBP25208 207 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 MYCNOSP40205 109 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 OR3A4PP47883 348 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 SNU13P55769 128 aaKnown RBP6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 SLC35B1P78383 322 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 RSU1Q15404 277 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 TMEM30BQ3MIR4 351 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 PAN3Q58A45 887 aaKnown RBP6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 BAIAP2L2Q6UXY1 529 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 TMPRSS11AQ6ZMR5 421 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 RNF144BQ7Z419 303 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 OR52I1Q8NGK6 324 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 OR13A1Q8NGR1 328 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 TNFAIP8L1Q8WVP5 186 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 TOMM40LQ969M1 308 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 GPER1Q99527 375 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 S100A13Q99584 98 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 CHCHD6Q9BRQ6 235 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 GON7Q9BXV9 100 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 SPACA1Q9HBV2 294 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 BABAM2Q9NXR7 383 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 KIF25Q9UIL4 384 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 ST3GAL6Q9Y274 331 aa6.18□□□□□ -1.42
PTCSC3-201ENST00000556013 A0A1W2PPI3 338 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 E9PI62 339 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 GABRPO00591 440 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 CA11O75493 328 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 HTR3BO95264 441 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 GLAP06280 429 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 SNRNP70P08621 437 aaKnown RBP6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 LIMS3P0CW19 117 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 LIMS4P0CW20 117 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 GTF2F2P13984 249 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 IGLL1P15814 213 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 CD1BP29016 333 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 ZNF93P35789 620 aaPredicted RBP6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 THBS3P49746 956 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 PPP3R1P63098 170 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 MED21Q13503 144 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 ATXN7L3Q14CW9 347 aaPredicted RBP6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 TMEM95Q3KNT9 176 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 HIST2H2BDQ6DRA6 164 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 CCDC121Q6ZUS5 278 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 ZNF554Q86TJ5 538 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 TGIF2LXQ8IUE1 241 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 FOXRED2Q8IWF2 684 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 C5orf56Q8N8D9 126 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 LINC00482Q8N8I6 264 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 SUMF2Q8NBJ7 301 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 OR8H1Q8NGG4 311 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 OR51A2Q8NGJ7 313 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 OR52N1Q8NH53 320 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 TSEN15Q8WW01 171 aaKnown RBP6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 DPF1Q92782 380 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 TMEM106AQ96A25 262 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 NR1H4Q96RI1 486 aaPredicted RBP6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 SLC29A1Q99808 456 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 DPCDQ9BVM2 203 aaPredicted RBP6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 PPIL3Q9H2H8 161 aaKnown RBP6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 S100A14Q9HCY8 104 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 AMBNQ9NP70 447 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 C8orf4Q9NR00 106 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 CHCHD3Q9NX63 227 aaKnown RBP6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 ZNF580Q9UK33 172 aa6.17□□□□□ -1.42
PTCSC3-201ENST00000556013 TMEM30CPA0ZSE6 113 aa6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 FAM90A10PA6NDY2 464 aa6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 FAM90A7PA6NKC0 464 aa6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 FAM90A23PA8MXZ1 464 aa6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 C15orf65H3BRN8 121 aa6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 TXNL1O43396 289 aa6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 PRB2P02812 416 aaPredicted RBP6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 CD1AP06126 327 aa6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 TMEM11P17152 192 aa6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 IGFBP3P17936 291 aaPredicted RBP6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 IL3RAP26951 378 aa6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 BDKRB2P30411 391 aa6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 GLP1RP43220 463 aa6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 GTF2A1P52655 376 aaPredicted RBP6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 ZNF137PP52743 207 aa6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 RPL23AP62750 156 aaKnown RBP6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 RBM39Q14498 530 aaKnown RBP6.16□□□□□ -1.42
PTCSC3-201ENST00000556013 PNLIPRP3Q17RR3 467 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms