RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 DEPPQ9NTK1 212 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 LYRM2Q9NU23 88 aaPredicted RBP6.01□□□□□ -1.45
TDP1-213ENST00000555880 ZDHHC8Q9ULC8 765 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 LOXL2Q9Y4K0 774 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 DOCK10Q96BY6 2186 aa6.01□□□□□ -1.45
TDP1-213ENST00000555880 A0A096LPE4 126 aa6□□□□□ -1.45
TDP1-213ENST00000555880 A0A1W2PPZ6 126 aa6□□□□□ -1.45
TDP1-213ENST00000555880 ZNF732B4DXR9 585 aa6□□□□□ -1.45
TDP1-213ENST00000555880 C1QL1O75973 258 aa6□□□□□ -1.45
TDP1-213ENST00000555880 F10P00742 488 aa6□□□□□ -1.45
TDP1-213ENST00000555880 S100A9P06702 114 aaKnown RBP6□□□□□ -1.45
TDP1-213ENST00000555880 MMP9P14780 707 aa6□□□□□ -1.45
TDP1-213ENST00000555880 ZNF14P17017 642 aaPredicted RBP6□□□□□ -1.45
TDP1-213ENST00000555880 VDAC1P21796 283 aa6□□□□□ -1.45
TDP1-213ENST00000555880 OMGP23515 440 aa6□□□□□ -1.45
TDP1-213ENST00000555880 ITGA3P26006 1051 aa6□□□□□ -1.45
TDP1-213ENST00000555880 AKR1C3P42330 323 aa6□□□□□ -1.45
TDP1-213ENST00000555880 MEOX2P50222 304 aa6□□□□□ -1.45
TDP1-213ENST00000555880 RAB1AP62820 205 aa6□□□□□ -1.45
TDP1-213ENST00000555880 S100A12P80511 92 aa6□□□□□ -1.45
TDP1-213ENST00000555880 TSC22D1Q15714 1073 aa6□□□□□ -1.45
TDP1-213ENST00000555880 SOHLH1Q5JUK2 328 aa6□□□□□ -1.45
TDP1-213ENST00000555880 KRBOX4Q5JUW0 171 aa6□□□□□ -1.45
TDP1-213ENST00000555880 C9orf135Q5VTT2 229 aa6□□□□□ -1.45
TDP1-213ENST00000555880 ZNF818PQ6ZRF7 136 aa6□□□□□ -1.45
TDP1-213ENST00000555880 C1orf229Q6ZS94 237 aaPredicted RBP6□□□□□ -1.45
TDP1-213ENST00000555880 SELENOHQ8IZQ5 122 aaKnown RBP6□□□□□ -1.45
TDP1-213ENST00000555880 ZNF561Q8N587 486 aa6□□□□□ -1.45
TDP1-213ENST00000555880 HPSE2Q8WWQ2 592 aa6□□□□□ -1.45
TDP1-213ENST00000555880 PSMF1Q92530 271 aa6□□□□□ -1.45
TDP1-213ENST00000555880 IL22RA2Q969J5 263 aa6□□□□□ -1.45
TDP1-213ENST00000555880 HIST1H2BAQ96A08 127 aa6□□□□□ -1.45
TDP1-213ENST00000555880 APH1AQ96BI3 265 aa6□□□□□ -1.45
TDP1-213ENST00000555880 ABHD17AQ96GS6 310 aa6□□□□□ -1.45
TDP1-213ENST00000555880 THOC3Q96J01 351 aaKnown RBP6□□□□□ -1.45
TDP1-213ENST00000555880 EGLN1Q9GZT9 426 aa6□□□□□ -1.45
TDP1-213ENST00000555880 CALHM2Q9HA72 323 aa6□□□□□ -1.45
TDP1-213ENST00000555880 COA4Q9NYJ1 87 aa6□□□□□ -1.45
TDP1-213ENST00000555880 FBXO7Q9Y3I1 522 aa6□□□□□ -1.45
TDP1-213ENST00000555880 ATP23Q9Y6H3 246 aa6□□□□□ -1.45
TDP1-213ENST00000555880 MUC3AQ02505 3323 aa6□□□□□ -1.45
TDP1-213ENST00000555880 A0A1B0GV50 99 aa6□□□□□ -1.45
TDP1-213ENST00000555880 IGSF23A1L1A6 192 aa6□□□□□ -1.45
TDP1-213ENST00000555880 LRP5LA4QPB2 252 aa6□□□□□ -1.45
TDP1-213ENST00000555880 PINLYPA6NC86 204 aa6□□□□□ -1.45
TDP1-213ENST00000555880 FAM24AA6NFZ4 105 aa6□□□□□ -1.45
TDP1-213ENST00000555880 SLC22A20A6NK97 555 aa6□□□□□ -1.45
TDP1-213ENST00000555880 ANKRD30BLA7E2S9 258 aa6□□□□□ -1.45
TDP1-213ENST00000555880 H0Y980 276 aa6□□□□□ -1.45
TDP1-213ENST00000555880 K7N7A8 449 aa6□□□□□ -1.45
TDP1-213ENST00000555880 HSPB6O14558 160 aa6□□□□□ -1.45
TDP1-213ENST00000555880 HSD17B6O14756 317 aa6□□□□□ -1.45
TDP1-213ENST00000555880 HLA-HP01893 362 aa6□□□□□ -1.45
TDP1-213ENST00000555880 S100A8P05109 93 aa6□□□□□ -1.45
TDP1-213ENST00000555880 SCTP09683 121 aa6□□□□□ -1.45
TDP1-213ENST00000555880 JMJD7P0C870 316 aa6□□□□□ -1.45
TDP1-213ENST00000555880 SP9P0CG40 484 aa6□□□□□ -1.45
TDP1-213ENST00000555880 ACP1P24666 158 aa6□□□□□ -1.45
TDP1-213ENST00000555880 UCP1P25874 307 aa6□□□□□ -1.45
TDP1-213ENST00000555880 ATP6V0CP27449 155 aa6□□□□□ -1.45
TDP1-213ENST00000555880 MPLP40238 635 aa6□□□□□ -1.45
TDP1-213ENST00000555880 ASCL1P50553 236 aa6□□□□□ -1.45
TDP1-213ENST00000555880 NOVA1P51513 510 aaKnown RBP6□□□□□ -1.45
TDP1-213ENST00000555880 POLR2GP62487 172 aaKnown RBP eCLIP6□□□□□ -1.45
TDP1-213ENST00000555880 HABP2Q14520 560 aaPredicted RBP6□□□□□ -1.45
TDP1-213ENST00000555880 SPINK14Q6IE38 97 aa6□□□□□ -1.45
TDP1-213ENST00000555880 Q6ZPA2 131 aa6□□□□□ -1.45
TDP1-213ENST00000555880 STX12Q86Y82 276 aa6□□□□□ -1.45
TDP1-213ENST00000555880 ZNF573Q86YE8 665 aa6□□□□□ -1.45
TDP1-213ENST00000555880 MCEMP1Q8IX19 187 aa6□□□□□ -1.45
TDP1-213ENST00000555880 IL22RA1Q8N6P7 574 aa6□□□□□ -1.45
TDP1-213ENST00000555880 ZFP62Q8NB50 900 aaPredicted RBP6□□□□□ -1.45
TDP1-213ENST00000555880 OR2M7Q8NG81 312 aa6□□□□□ -1.45
TDP1-213ENST00000555880 OR5A2Q8NGI9 324 aa6□□□□□ -1.45
TDP1-213ENST00000555880 OR5D13Q8NGL4 314 aa6□□□□□ -1.45
TDP1-213ENST00000555880 OR5C1Q8NGR4 320 aa6□□□□□ -1.45
TDP1-213ENST00000555880 OR10J5Q8NHC4 309 aa6□□□□□ -1.45
TDP1-213ENST00000555880 RNASE11Q8TAA1 199 aaKnown RBP6□□□□□ -1.45
TDP1-213ENST00000555880 GTF3AQ92664 365 aaKnown RBP6□□□□□ -1.45
TDP1-213ENST00000555880 TAAR9Q96RI9 348 aa6□□□□□ -1.45
TDP1-213ENST00000555880 C20orf24Q9BUV8 137 aa6□□□□□ -1.45
TDP1-213ENST00000555880 MAGT1Q9H0U3 335 aa6□□□□□ -1.45
TDP1-213ENST00000555880 ARRDC1-AS1Q9H2J1 176 aa6□□□□□ -1.45
TDP1-213ENST00000555880 ESRP2Q9H6T0 727 aaKnown RBP6□□□□□ -1.45
TDP1-213ENST00000555880 ZNF703Q9H7S9 590 aaPredicted RBP6□□□□□ -1.45
TDP1-213ENST00000555880 TNRC6AQ8NDV7 1962 aaKnown RBP6□□□□□ -1.45
TDP1-213ENST00000555880 A0A1W2PPH5 198 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 CLEC18AA5D8T8 446 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 RBFOX3A6NFN3 312 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 OR5B21A6NL26 309 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 ZNF724A8MTY0 619 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 TUSC2O75896 110 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 SERPINE2P07093 398 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 ZNF883P0CG24 379 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 OR13C7P0DN81 318 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 CCL2P13500 99 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 RAB5AP20339 215 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 APLNRP35414 380 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 PPP1CCP36873 323 aaKnown RBP5.99□□□□□ -1.45
TDP1-213ENST00000555880 SULT1A1P50225 295 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms