RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 IFNA17P01571 189 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 GLI4P10075 376 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 ZNF14P17017 642 aaPredicted RBP13.87□□□□□ -0.19
TUBB3-209ENST00000555609 HAAOP46952 286 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 PRSS12P56730 875 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 PDCD1Q15116 288 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 ETV3LQ6ZN32 361 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 NAXEQ8NCW5 288 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 CD300LFQ8TDQ1 290 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 SLAMF9Q96A28 289 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 IP6K3Q96PC2 410 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 SIGLEC12Q96PQ1 595 aa13.87□□□□□ -0.19
TUBB3-209ENST00000555609 MED12Q93074 2177 aa13.86□□□□□ -0.19
TUBB3-209ENST00000555609 VPS13AQ96RL7 3174 aa13.86□□□□□ -0.19
TUBB3-209ENST00000555609 A0A087WWC5 75 aa13.86□□□□□ -0.19
TUBB3-209ENST00000555609 A0A1B0GU03 582 aa13.86□□□□□ -0.19
TUBB3-209ENST00000555609 PROB1E7EW31 1015 aa13.86□□□□□ -0.19
TUBB3-209ENST00000555609 C1QL1O75973 258 aa13.86□□□□□ -0.19
TUBB3-209ENST00000555609 SYNGR4O95473 234 aa13.86□□□□□ -0.19
TUBB3-209ENST00000555609 HSPB1P04792 205 aaKnown RBP13.86□□□□□ -0.19
TUBB3-209ENST00000555609 ACAA1P09110 424 aaPredicted RBP13.86□□□□□ -0.19
TUBB3-209ENST00000555609 PPP1CCP36873 323 aaKnown RBP13.86□□□□□ -0.19
TUBB3-209ENST00000555609 TLE4Q04727 773 aa13.86□□□□□ -0.19
TUBB3-209ENST00000555609 ZNF880Q6PDB4 577 aa13.86□□□□□ -0.19
TUBB3-209ENST00000555609 SPSB3Q6PJ21 355 aa13.86□□□□□ -0.19
TUBB3-209ENST00000555609 ZNF845Q96IR2 970 aaPredicted RBP13.86□□□□□ -0.19
TUBB3-209ENST00000555609 SEBOXQ9HB31 216 aaPredicted RBP13.86□□□□□ -0.19
TUBB3-209ENST00000555609 MPC1Q9Y5U8 109 aa13.86□□□□□ -0.19
TUBB3-209ENST00000555609 PI4KAP42356 2102 aa13.86□□□□□ -0.19
TUBB3-209ENST00000555609 A0A1W2PPH5 198 aa13.85□□□□□ -0.19
TUBB3-209ENST00000555609 WRBO00258 174 aa13.85□□□□□ -0.19
TUBB3-209ENST00000555609 SSSCA1O60232 199 aa13.85□□□□□ -0.19
TUBB3-209ENST00000555609 SCTP09683 121 aa13.85□□□□□ -0.19
TUBB3-209ENST00000555609 KRBOX4Q5JUW0 171 aa13.85□□□□□ -0.19
TUBB3-209ENST00000555609 OR10G4Q8NGN3 311 aa13.85□□□□□ -0.19
TUBB3-209ENST00000555609 OR5C1Q8NGR4 320 aa13.85□□□□□ -0.19
TUBB3-209ENST00000555609 ATP5SQ99766 215 aa13.85□□□□□ -0.19
TUBB3-209ENST00000555609 TRAV1-1A0A0B4J248 108 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 OR5B21A6NL26 309 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 A6NLC8 198 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 IGHV2-5P01817 119 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 ACP1P24666 158 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 LHX2P50458 406 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 GPM6AP51674 278 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 ZNF506Q5JVG8 444 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 ZNF573Q86YE8 665 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 PLPPR1Q8TBJ4 325 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 CT55Q8WUE5 264 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 RAB40CQ96S21 281 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 PKIBQ9C010 78 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 MTCH1Q9NZJ7 389 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 CXorf65A6NEN9 183 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 NPIPB11E5RHQ5 1161 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 PGLYRP1O75594 196 aaPredicted RBP13.84□□□□□ -0.19
TUBB3-209ENST00000555609 OR13C7P0DN81 318 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 F2RP25116 425 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 AKR1C3P42330 323 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 DYNLT3P51808 116 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 TAS2R30P59541 319 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 RPL23AP62750 156 aaKnown RBP13.84□□□□□ -0.19
TUBB3-209ENST00000555609 HERPUD1Q15011 391 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 CXorf66Q5JRM2 361 aaPredicted RBP13.84□□□□□ -0.19
TUBB3-209ENST00000555609 AKR1C8PQ5T2L2 129 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 TMEM105Q8N8V8 129 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 TMEM171Q8WVE6 324 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 TCTEX1D2Q8WW35 142 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 YPEL4Q96NS1 127 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 ZNF251Q9BRH9 671 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 CABLES2Q9BTV7 478 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 FGF23Q9GZV9 251 aaPredicted RBP13.84□□□□□ -0.19
TUBB3-209ENST00000555609 LRFN1Q9P244 771 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 OR2W1Q9Y3N9 320 aa13.84□□□□□ -0.19
TUBB3-209ENST00000555609 C5orf49A4QMS7 147 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 PINLYPA6NC86 204 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 SRP19P09132 144 aaKnown RBP13.83□□□□□ -0.2
TUBB3-209ENST00000555609 PLP2Q04941 152 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 ACSF3Q4G176 576 aaPredicted RBP13.83□□□□□ -0.2
TUBB3-209ENST00000555609 TCEAL6Q6IPX3 200 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 SLC23A3Q6PIS1 610 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 STX12Q86Y82 276 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 OR2M7Q8NG81 312 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 MRPL30Q8TCC3 161 aaKnown RBP13.83□□□□□ -0.2
TUBB3-209ENST00000555609 NEK7Q8TDX7 302 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 OR5P3Q8WZ94 311 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 PSMF1Q92530 271 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 LSM10Q969L4 123 aaKnown RBP13.83□□□□□ -0.2
TUBB3-209ENST00000555609 SIRT7Q9NRC8 400 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 CCL28Q9NRJ3 127 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 TREM2Q9NZC2 230 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 ABI3Q9P2A4 366 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 RNF150Q9ULK6 438 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 RNF115Q9Y4L5 304 aa13.83□□□□□ -0.2
TUBB3-209ENST00000555609 IGKV1D-13A0A0B4J2D9 117 aa13.82□□□□□ -0.2
TUBB3-209ENST00000555609 ANKRD30BLA7E2S9 258 aa13.82□□□□□ -0.2
TUBB3-209ENST00000555609 AP4M1O00189 453 aa13.82□□□□□ -0.2
TUBB3-209ENST00000555609 HSD17B6O14756 317 aa13.82□□□□□ -0.2
TUBB3-209ENST00000555609 DEGS1O15121 323 aa13.82□□□□□ -0.2
TUBB3-209ENST00000555609 CHST1O43916 411 aa13.82□□□□□ -0.2
TUBB3-209ENST00000555609 OR2C1O95371 312 aa13.82□□□□□ -0.2
TUBB3-209ENST00000555609 IGKV1-13P0DP09 117 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms