RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 POLR3KQ9Y2Y1 108 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-218ENST00000555213 NF1P21359 2839 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 CSPG4Q6UVK1 2322 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 TRBV23-1A0A0A0MS06 115 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 IGHV2-70DA0A0C4DH43 119 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 A0A1W2PPH5 198 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 H3BUI4 141 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 DEGS1O15121 323 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 CA11O75493 328 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 SCGNO76038 276 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 LIPFP07098 398 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 GSTP1P09211 210 aaKnown RBP9.04□□□□□ -0.96
SHMT2-218ENST00000555213 NAT1P18440 290 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 ZFP36P26651 326 aaKnown RBP9.04□□□□□ -0.96
SHMT2-218ENST00000555213 DUSP1P28562 367 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 COL10A1Q03692 680 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 PNLIPRP3Q17RR3 467 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 RGS21Q2M5E4 152 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 HACD4Q5VWC8 232 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 FAHD2BQ6P2I3 314 aaPredicted RBP9.04□□□□□ -0.96
SHMT2-218ENST00000555213 ZNF841Q6ZN19 808 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 C6orf201Q7Z4U5 140 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 NRARPQ7Z6K4 114 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 CD177Q8N6Q3 437 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 GVQW1Q8N7I0 195 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 ZNRF1Q8ND25 227 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 SETD6Q8TBK2 473 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 FAHD2AQ96GK7 314 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 SULT4A1Q9BR01 284 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 OCSTAMPQ9BR26 566 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 FAAP24Q9BTP7 215 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 SCPEP1Q9HB40 452 aa9.04□□□□□ -0.96
SHMT2-218ENST00000555213 RCC2Q9P258 522 aaKnown RBP9.04□□□□□ -0.96
SHMT2-218ENST00000555213 TLN2Q9Y4G6 2542 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 CELSR1Q9NYQ6 3014 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.03□□□□□ -0.963e-7■■□□□ 13.9
SHMT2-218ENST00000555213 TRAV24A0A0B4J272 114 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 A0A1B0GW55 424 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 MEIS3P1A6NDR6 274 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 FAM90A10PA6NDY2 464 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 FAM90A18PA6NE21 464 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 FAM90A16PA6NEW6 464 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 FAM90A20PA6NIJ5 464 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 FAM90A8PA6NJQ4 464 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 FAM90A7PA6NKC0 464 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 FAM90A22PA8MWA6 464 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 FAM90A12PA8MX19 464 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 FAM90A5PA8MXJ8 464 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 FAM90A23PA8MXZ1 464 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 SIRPB1O00241 398 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 RBBP9O75884 186 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 OR7C1O76099 320 aaPredicted RBP9.03□□□□□ -0.96
SHMT2-218ENST00000555213 OR2H2O95918 312 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 TFF1P04155 84 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 TK1P04183 234 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 FAM90A15PP0C7V4 464 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 FAM90A13PP0C7W8 464 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 FAM90A14PP0C7W9 464 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 FAM90A24PP0C7X0 464 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 DUX4L2P0CJ85 424 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 DUX4L3P0CJ86 424 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 DUX4L4P0CJ87 422 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 DUX4L5P0CJ88 424 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 DUX4L6P0CJ89 424 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 DUX4L7P0CJ90 424 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 SELLP14151 372 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 AMY2BP19961 511 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 DYRK1AQ13627 763 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 GRK1Q15835 563 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 FAM189A2Q15884 450 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 MPV17LQ2QL34 196 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 PLA1AQ53H76 456 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 TRIQKQ629K1 86 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 DUX4L9Q6RFH8 374 aaPredicted RBP9.03□□□□□ -0.96
SHMT2-218ENST00000555213 BTN2A1Q7KYR7 527 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 DUSP18Q8NEJ0 188 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 OR5D13Q8NGL4 314 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 NUDCD2Q8WVJ2 157 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 PHF21AQ96BD5 680 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 SNX22Q96L94 193 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 GSX1Q9H4S2 264 aaPredicted RBP9.03□□□□□ -0.96
SHMT2-218ENST00000555213 IFT22Q9H7X7 185 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 SPACA1Q9HBV2 294 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 HRASLSQ9HDD0 168 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 TMEM160Q9NX00 188 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 DUX4Q9UBX2 424 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 LPAR3Q9UBY5 353 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 RPUSD1Q9UJJ7 312 aaKnown RBP9.03□□□□□ -0.96
SHMT2-218ENST00000555213 MAB21L2Q9Y586 359 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 ABCA1O95477 2261 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 HIVEP2P31629 2446 aa9.03□□□□□ -0.96
SHMT2-218ENST00000555213 SETD2Q9BYW2 2564 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-218ENST00000555213 IGKV1D-8A0A087WSZ0 117 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 FUOMA2VDF0 154 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 C22orf46C9J442 243 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 K7N7A8 449 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 MGST3O14880 152 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 LYRM1O43325 122 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 ZNF737O75373 536 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 FCER2P06734 321 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms