RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 KCNS2Q9ULS6 477 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 PIAS3Q9Y6X2 628 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 GTF3C1Q12789 2109 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 HS3ST1O14792 307 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 DFFBO76075 338 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 IFNA5P01569 189 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 CFPP27918 469 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 MNX1P50219 401 aaPredicted RBP7.68□□□□□ -1.18
SYNE2-217ENST00000555022 FAM78BQ5VT40 261 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 PLCXD3Q63HM9 321 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 FAM90A2PQ658T7 463 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 Q6ZPA2 131 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 ZNF818PQ6ZRF7 136 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 ST6GALNAC3Q8NDV1 305 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 LFNGQ8NES3 379 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 RDH5Q92781 318 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 DDIT4LQ96D03 193 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 PLPPR2Q96GM1 343 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 ZNF286AQ9HBT8 521 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 PPP1R3CQ9UQK1 317 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 DSPP15924 2871 aaKnown RBP7.67□□□□□ -1.18
SYNE2-217ENST00000555022 DNAJC13O75165 2243 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 PRR14LQ5THK1 2151 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 SERPINE3A8MV23 424 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 PPYP01298 95 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 IGKV3-11P04433 115 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 OR5I1Q13606 314 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 RAET1LQ5VY80 246 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 CRIP3Q6Q6R5 217 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 C1QL4Q86Z23 238 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 DTD1Q8TEA8 209 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 LHX4Q969G2 390 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 TBX15Q96SF7 602 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 NEU1Q99519 415 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 METTL9Q9H1A3 318 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 UCK1Q9HA47 277 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 DVL1O14640 695 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 MPPED1O15442 326 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 TGOLN2O43493 480 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 RBMXL2O75526 392 aaKnown RBP7.67□□□□□ -1.18
SYNE2-217ENST00000555022 THBS3P49746 956 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 HOXA4Q00056 320 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-217ENST00000555022 OR51G1Q8NGK1 321 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 OR5B12Q96R08 314 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 C1QTNF9BB2RNN3 333 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 PMELP40967 661 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 TLE4Q04727 773 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 ARL16Q0P5N6 197 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 HERPUD1Q15011 391 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 JOSD1Q15040 202 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-217ENST00000555022 FAM53AQ6NSI3 398 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-217ENST00000555022 C2orf88Q9BSF0 95 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 PLEKHF2Q9H8W4 249 aa7.67□□□□□ -1.18
SYNE2-217ENST00000555022 ASPMQ8IZT6 3477 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 FREM1Q5H8C1 2179 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 ELOA3CA0A087WX78 387 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-217ENST00000555022 LOC102723971A0A1B0GUV8 181 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 MAP1LC3B2A6NCE7 125 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 AQP7O14520 342 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 TRAF3IP2O43734 574 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-217ENST00000555022 IRF2P14316 349 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 CAPZBP47756 277 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 SLC35B1P78383 322 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 IGLV3-21P80748 117 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-217ENST00000555022 ZNF726P1Q15940 193 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 SLC23A3Q6PIS1 610 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 TMEM183AQ8IXX5 376 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 ATOH7Q8N100 152 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 KDF1Q8NAX2 398 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-217ENST00000555022 OR10V1Q8NGI7 309 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 KLHDC7BQ96G42 594 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 TOX2Q96NM4 488 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 SYT3Q9BQG1 590 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 MAP1LC3BQ9GZQ8 125 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 AKIRIN1Q9H9L7 192 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-217ENST00000555022 Q9N2K0 584 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 PITPNC1Q9UKF7 332 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 RNF150Q9ULK6 438 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 GOLT1BQ9Y3E0 138 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 KIR2DS5A0A0G2JLQ3 304 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 A0A0G2JNG1 304 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 ZNF320A2RRD8 509 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 KIR2DS3K7RE56 304 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 BCL2P10415 239 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 FGF5P12034 268 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 GABRG2P18507 467 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 GNG10P50151 68 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 RPP30P78346 268 aaKnown RBP7.66□□□□□ -1.18
SYNE2-217ENST00000555022 IL13RA2Q14627 380 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 KIR2DS5Q14953 304 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 IFI44Q8TCB0 444 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 ZNF845Q96IR2 970 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-217ENST00000555022 C18orf12Q96KH6 178 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 Q96M66 194 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 TMEM208Q9BTX3 173 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 PNRC2Q9NPJ4 139 aaKnown RBP7.66□□□□□ -1.18
SYNE2-217ENST00000555022 FKBP11Q9NYL4 201 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 CACNG5Q9UF02 275 aa7.66□□□□□ -1.18
SYNE2-217ENST00000555022 SIRPB1O00241 398 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 DHRS3O75911 302 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms