RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	SLC22A6	Q4U2R8	563 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	YIF1B	Q5BJH7	314 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	ATPAF1	Q5TC12	328 aa	Predicted RBP	3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	STUM	Q69YW2	141 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	TMEM200B	Q69YZ2	307 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	DMKN	Q6E0U4	476 aa	Predicted RBP	3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	C1QL2	Q7Z5L3	287 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994		Q8IYB0	196 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	PNKD	Q8N490	385 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	PARP16	Q8N5Y8	322 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	TPRX1	Q8N7U7	411 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	OR4S1	Q8NGB4	309 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	OR51A2	Q8NGJ7	313 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	PPP1R35	Q8TAP8	253 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	CCDC107	Q8WV48	283 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	RGP1	Q92546	391 aa	Predicted RBP	3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	MUL1	Q969V5	352 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	SPSB1	Q96BD6	273 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	C12orf43	Q96C57	262 aa	Known RBP	3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	FOXRED1	Q96CU9	486 aa	Predicted RBP	3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	SMIM19	Q96E16	107 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	CPNE2	Q96FN4	548 aa	Predicted RBP	3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	SNX22	Q96L94	193 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	ZNF184	Q99676	751 aa	Predicted RBP	3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	NRIP2	Q9BQI9	281 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	DCTN5	Q9BTE1	182 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	SUCNR1	Q9BXA5	334 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	ANKRD60	Q9BZ19	345 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	DNTTIP1	Q9H147	329 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	PPA2	Q9H2U2	334 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	BANF2	Q9H503	90 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	NOX4	Q9NPH5	578 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	TMEM138	Q9NPI0	162 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	PCDHB16	Q9NRJ7	776 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	IL36RN	Q9UBH0	155 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	KAAG1	Q9UBP8	84 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	OPN4	Q9UHM6	478 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	MRPS28	Q9Y2Q9	187 aa	Known RBP	3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	MAB21L2	Q9Y586	359 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	DNAH1	Q9P2D7	4330 aa		3.81	□□□□□ -1.8
ATXN3-231	ENST00000554994	COL7A1	Q02388	2944 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	TRAV8-7	A0A075B6U6	113 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	TRAV39	A0A0B4J263	110 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	IGHV1-69D	A0A0B4J2H0	117 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	IGKV1-12	A0A0C4DH73	117 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	CENPVL3	A0A0U1RRI6	287 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	MDFIC2	A0A1B0GVS7	189 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	SMIM31	A0A1B0GVY4	71 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	UBE2QL1	A1L167	161 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	MEIOC	A2RUB1	952 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	FUOM	A2VDF0	154 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994		A8MXK9	166 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994		K7N7A8	449 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	GABRP	O00591	440 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	DENR	O43583	198 aa	Known RBP	3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	NOS1AP	O75052	506 aa	Predicted RBP	3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	FCN3	O75636	299 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	KDM4B	O94953	1096 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	FSTL3	O95633	263 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	OR2H2	O95918	312 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	IGKV1D-12	P01611	117 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	IGHV1-69	P01742	117 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	ALDOB	P05062	364 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	CCL3L1	P16619	93 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	SRM	P19623	302 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	NFYB	P25208	207 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	MAPK3	P27361	379 aa	Predicted RBP	3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	PSMB9	P28065	219 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	MTNR1B	P49286	362 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	CAV3	P56539	151 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	KRTAP10-7	P60409	375 aa	Predicted RBP	3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	RPS25	P62851	125 aa	Known RBP	3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	SLC35A2	P78381	396 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	ATXN7L3	Q14CW9	347 aa	Predicted RBP	3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	DEFB112	Q30KQ8	113 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	PIGY	Q3MUY2	71 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	HSD17B12	Q53GQ0	312 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	PLA1A	Q53H76	456 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	PAN3	Q58A45	887 aa	Known RBP	3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	KLF17	Q5JT82	389 aa	Predicted RBP	3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	KRBOX4	Q5JUW0	171 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	FAM27D1	Q5T7N8	215 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	GLT8D1	Q68CQ7	371 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	AWAT2	Q6E213	333 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	KRTAP5-11	Q6L8G4	156 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	GLIPR1L1	Q6UWM5	242 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	ZNF782	Q6ZMW2	699 aa	Predicted RBP	3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994		Q6ZSR3	168 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	PRSS48	Q7RTY5	328 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	SAXO1	Q8IYX7	474 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	OSR2	Q8N2R0	312 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	MS4A15	Q8N5U1	240 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	OR51T1	Q8NGJ9	327 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	SETD6	Q8TBK2	473 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	TBC1D15	Q8TC07	691 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	FAM46B	Q96A09	425 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	SDSL	Q96GA7	329 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	TBX15	Q96SF7	602 aa		3.8	□□□□□ -1.8
ATXN3-231	ENST00000554994	TSC22D3	Q99576	134 aa		3.8	□□□□□ -1.8

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