RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 UBQLN2Q9UHD9 624 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 WIPI2Q9Y4P8 454 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 APC2O95996 2303 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 DPRXA6NFQ7 191 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 TIMM8AO60220 97 aaPredicted RBP7.5□□□□□ -1.21
TDP1-210ENST00000554976 SLC34A2O95436 690 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 DUSP1P28562 367 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 RBMXP38159 391 aaKnown RBP7.5□□□□□ -1.21
TDP1-210ENST00000554976 MDH2P40926 338 aaKnown RBP7.5□□□□□ -1.21
TDP1-210ENST00000554976 FABP6P51161 128 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 RAB14P61106 215 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 IL15RAQ13261 267 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 LPCAT3Q6P1A2 487 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 ZNF826PQ6ZT77 177 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 UXS1Q8NBZ7 420 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 MRPL37Q9BZE1 423 aaKnown RBP7.5□□□□□ -1.21
TDP1-210ENST00000554976 WDR13Q9H1Z4 485 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 ESRP2Q9H6T0 727 aaKnown RBP7.5□□□□□ -1.21
TDP1-210ENST00000554976 SPACA1Q9HBV2 294 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 MED9Q9NWA0 146 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 MGAT4AQ9UM21 535 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 ATP23Q9Y6H3 246 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 SESN1Q9Y6P5 492 aa7.5□□□□□ -1.21
TDP1-210ENST00000554976 TRDCB7Z8K6 153 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 EEF1E1-BLOC1S5C9J1V9 151 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 C16orf97H3BN30 126 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 WNT9BO14905 357 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 SCTP09683 121 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 EGR1P18146 543 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 CXCL2P19875 107 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 TUSC1Q2TAM9 212 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 TMEM17Q86X19 198 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 ZNF442Q9H7R0 627 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 KIF25Q9UIL4 384 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 PTPRQQ9UMZ3 2332 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 RAB19A4D1S5 217 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 TSC22D2O75157 780 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 H2AFB1P0C5Y9 115 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 DNASE1P24855 282 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 CD34P28906 385 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 GCH1P30793 250 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 ADORA2A-AS1P86434 159 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 SSX8Q7RTT4 187 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 OR2T35Q8NGX2 323 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 MUCL1Q96DR8 90 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 REG4Q9BYZ8 158 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 RIMS4Q9H426 269 aaPredicted RBP7.49□□□□□ -1.21
TDP1-210ENST00000554976 RDH8Q9NYR8 311 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 PRR14LQ5THK1 2151 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 MFSD2BA6NFX1 497 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 HMSDA8MTL9 139 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 SRRM5B3KS81 715 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 MCRIP1C9JLW8 97 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 PSPNO60542 156 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 CLN5O75503 358 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 KNG1P01042 644 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 IGLV2-14P01704 120 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 GRPP07492 148 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 ADH4P08319 380 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 WNT2P09544 360 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 IL13RA1P78552 427 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 EXOSC2Q13868 293 aaKnown RBP7.49□□□□□ -1.21
TDP1-210ENST00000554976 CDSNQ15517 529 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 HMGN3Q15651 99 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 FAM222BQ8WU58 562 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 ZCCHC14Q8WYQ9 949 aaKnown RBP7.49□□□□□ -1.21
TDP1-210ENST00000554976 MRPL24Q96A35 216 aaKnown RBP7.49□□□□□ -1.21
TDP1-210ENST00000554976 ZNF251Q9BRH9 671 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 TOLLIPQ9H0E2 274 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 GSN-AS1Q9NRJ2 163 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 PFDN2Q9UHV9 154 aa7.49□□□□□ -1.21
TDP1-210ENST00000554976 DSCAML1Q8TD84 2053 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 ZZEF1O43149 2961 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 ITPR1Q14643 2758 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 TRBV6-7A0A0A0MS04 114 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.48□□□□□ -1.21
TDP1-210ENST00000554976 ZNF205O95201 554 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 HAND1O96004 215 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 CRYAAP02489 173 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 IFNA4P05014 189 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 LYL1P12980 280 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 AKR1C4P17516 323 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 PI3P19957 117 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 AADACP22760 399 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 LOXP28300 417 aaPredicted RBP7.48□□□□□ -1.21
TDP1-210ENST00000554976 CEBPDP49716 269 aaPredicted RBP7.48□□□□□ -1.21
TDP1-210ENST00000554976 SEC61A1P61619 476 aaKnown RBP7.48□□□□□ -1.21
TDP1-210ENST00000554976 HLA-DRB3P79483 266 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 RBPJQ06330 500 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 RND1Q92730 232 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 GALNT14Q96FL9 552 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 MEGF10Q96KG7 1140 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 WFIKKN1Q96NZ8 548 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 SCGB3A2Q96PL1 93 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 RASL12Q9NYN1 266 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 SHISA9B4DS77 424 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 DNASE2O00115 360 aaPredicted RBP7.48□□□□□ -1.21
TDP1-210ENST00000554976 HS3ST1O14792 307 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 DEGS1O15121 323 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 MPC2O95563 127 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms