RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TMEM200BQ69YZ2 307 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 C1orf122Q6ZSJ8 110 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 ZNF554Q86TJ5 538 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 OR4M2Q8NGB6 313 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 LPAR2Q9HBW0 351 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 C12orf4Q9NQ89 552 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 HIF1ANQ9NWT6 349 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 TAS2R3Q9NYW6 316 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 RABL2AQ9UBK7 228 aaPredicted RBP13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 KIF25Q9UIL4 384 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 RABL2BQ9UNT1 228 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 KCNK7Q9Y2U2 307 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 ZANQ9Y493 2812 aa13.57□□□□□ -0.24
SPTLC2-203ENST00000554901 ABCA1O95477 2261 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 CELSR1Q9NYQ6 3014 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 MEIKINA0A087WXM9 373 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 TRBV6-6A0A0A6YYG2 114 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 FAM25AB3EWG3 89 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 FAM25CB3EWG5 89 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 FAM25GB3EWG6 89 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 CLPXO76031 633 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 NAPSAO96009 420 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 RBP4P02753 201 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 MELTFP08582 738 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 GNB3P16520 340 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 MNDAP41218 407 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 MRPS15P82914 257 aaKnown RBP13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 ZNF260Q3ZCT1 412 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 TMEM69Q5SWH9 247 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 DCAF12L2Q5VW00 463 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 TRAT1Q6PIZ9 186 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 FAM185AQ8N0U4 392 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 OR4M1Q8NGD0 313 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 C15orf40Q8WUR7 153 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 WDFY2Q96P53 400 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 MIXL1Q9H2W2 232 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 AK3Q9UIJ7 227 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 KPTNQ9Y664 436 aa13.56□□□□□ -0.24
SPTLC2-203ENST00000554901 HIVEP1P15822 2718 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 TRAV18A0A075B6X5 111 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 hCG_1809904A0A1W2PP81 198 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 A0A1W2PPE2 198 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 A0A1W2PR64 198 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 A0A1W2PRV1 198 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 M0R1W7 72 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 CD3GP09693 182 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 GZMHP20718 246 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 S100A5P33763 92 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 HACD4Q5VWC8 232 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 BAIAP2L2Q6UXY1 529 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 MOB1BQ7L9L4 216 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 LAX1Q8IWV1 398 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 TPRX1Q8N7U7 411 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 CMSS1Q9BQ75 279 aaKnown RBP13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 GAL3ST2Q9H3Q3 398 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 AUNIPQ9H7T9 357 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 RAB9BQ9NP90 201 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 MMP26Q9NRE1 261 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 MBNL3Q9NUK0 354 aaKnown RBP13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 OPN4Q9UHM6 478 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 MGAT4AQ9UM21 535 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 CSPG4Q6UVK1 2322 aa13.55□□□□□ -0.24
SPTLC2-203ENST00000554901 ZNF729A6NN14 1252 aaPredicted RBP13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 ZNF728P0DKX0 622 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 ZNF16P17020 682 aaPredicted RBP13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 PAX8Q06710 450 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 KRTAP1-1Q07627 177 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 CNPY1Q3B7I2 92 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 C6orf183Q5T699 404 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 LINC00299Q6ZSB3 139 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 TRAPPC6BQ86SZ2 158 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 MRPL30Q8TCC3 161 aaKnown RBP13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 DYRK2Q92630 601 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 ZNF714Q96N38 554 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 LINC00574Q9H8X3 128 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 TRAPPC2LQ9UL33 140 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 ORC5O43913 435 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 TAS2R20P59543 309 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 ARFRP1Q13795 201 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 ZNF273Q14593 569 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 SRSF7Q16629 238 aaKnown RBP eCLIP13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 ZNF880Q6PDB4 577 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 TCF23Q7RTU1 214 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 UNKLQ9H9P5 680 aaKnown RBP13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 ZMAT3Q9HA38 289 aaKnown RBP13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 ING3Q9NXR8 418 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 PTTG2Q9NZH5 202 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 EXTL2Q9UBQ6 330 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 KCNS2Q9ULS6 477 aa13.54□□□□□ -0.24
SPTLC2-203ENST00000554901 KBTBD11-OT1A0A1B0GTJ5 212 aa13.53□□□□□ -0.24
SPTLC2-203ENST00000554901 TMEM235A6NFC5 223 aa13.53□□□□□ -0.24
SPTLC2-203ENST00000554901 C17orf98A8MV24 154 aa13.53□□□□□ -0.24
SPTLC2-203ENST00000554901 CGB3P0DN86 165 aa13.53□□□□□ -0.24
SPTLC2-203ENST00000554901 CGB7P0DN87 165 aa13.53□□□□□ -0.24
SPTLC2-203ENST00000554901 DTYMKP23919 212 aa13.53□□□□□ -0.24
SPTLC2-203ENST00000554901 DLX6P56179 175 aa13.53□□□□□ -0.24
SPTLC2-203ENST00000554901 GNG2P59768 71 aa13.53□□□□□ -0.24
SPTLC2-203ENST00000554901 METTL11BQ5VVY1 283 aa13.53□□□□□ -0.24
SPTLC2-203ENST00000554901 OLFML2AQ68BL7 652 aa13.53□□□□□ -0.24
SPTLC2-203ENST00000554901 CNIH2Q6PI25 160 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms