RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 IGHV3-7P01780 117 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 JUNBP17275 347 aaPredicted RBP8.62□□□□□ -1.03
SHMT2-213ENST00000554600 GABRA5P31644 462 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 KCNJ3P48549 501 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 PRRX1P54821 245 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 MPV17LQ2QL34 196 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 HSD17B12Q53GQ0 312 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 ARSJQ5FYB0 599 aaPredicted RBP8.62□□□□□ -1.03
SHMT2-213ENST00000554600 FAM27D1Q5T7N8 215 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 RSBN1Q5VWQ0 802 aaPredicted RBP8.62□□□□□ -1.03
SHMT2-213ENST00000554600 CEACAM19Q7Z692 300 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 LINC00596Q86U02 117 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 RTN4RL2Q86UN3 420 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 TMEM219Q86XT9 240 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 Q8NFD4 153 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 RFESDQ8TAC1 157 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 ZNF596Q8TC21 504 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 TMEM203Q969S6 136 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 FAM46BQ96A09 425 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 SELENOIQ9C0D9 397 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 NPFFR1Q9GZQ6 430 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 DUSP21Q9H596 190 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 ZNF286AQ9HBT8 521 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 DPM3Q9P2X0 92 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 BLOC1S6Q9UL45 172 aa8.62□□□□□ -1.03
SHMT2-213ENST00000554600 LSM2Q9Y333 95 aaKnown RBP8.62□□□□□ -1.03
SHMT2-213ENST00000554600 KBTBD11-OT1A0A1B0GTJ5 212 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 LEUTXA8MZ59 168 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 MCRIP1C9JLW8 97 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 H3BUI4 141 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 CHST1O43916 411 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 TSPAN9O75954 239 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 MGMTP16455 207 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 CRHBPP24387 322 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 CEACAM3P40198 252 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 MAP2K4P45985 399 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 ARHGDIBP52566 201 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 GPR50Q13585 617 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 IRF3Q14653 427 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 C17orf58Q2M2W7 97 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 NHLRC3Q5JS37 347 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 LDLRAD2Q5SZI1 272 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 GLT8D1Q68CQ7 371 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 LIAT1Q6ZQX7 453 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 PRSS48Q7RTY5 328 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 CDH26Q8IXH8 852 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 OR4P4Q8NGL7 312 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 OR2T6Q8NHC8 308 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 CCDC107Q8WV48 283 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 Q9H521 79 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 C16orf95Q9H693 158 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 IDI2-AS1Q9NZ38 188 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 PITPNC1Q9UKF7 332 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 TCF19Q9Y242 345 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 SIGLEC9Q9Y336 463 aa8.61□□□□□ -1.03
SHMT2-213ENST00000554600 VGLL3A8MV65 326 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 AIPO00170 330 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 MPIG6BO95866 241 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 IL1AP01583 271 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 BRS3P32247 399 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 SSTR5P35346 364 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 GNG10P50151 68 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 PROK1P58294 105 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 RPS25P62851 125 aaKnown RBP8.6□□□□□ -1.03
SHMT2-213ENST00000554600 RAB12Q6IQ22 244 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 UNQ9370/PRO34162Q6UXP9 181 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 OR9G1Q8NH87 305 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 UBALD1Q8TB05 177 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 PIFOQ8TCI5 191 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 CAPSLQ8WWF8 208 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 LEAP2Q969E1 77 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 CREB3L1Q96BA8 519 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 MRPS24Q96EL2 167 aaKnown RBP8.6□□□□□ -1.03
SHMT2-213ENST00000554600 KIRREL1Q96J84 757 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 UQCC2Q9BRT2 126 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 CST11Q9H112 138 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 NCOR1P1Q9H4R4 102 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 IFT22Q9H7X7 185 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 SPACA1Q9HBV2 294 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 ETAA1Q9NY74 926 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 AMMECR1Q9Y4X0 333 aaPredicted RBP8.6□□□□□ -1.03
SHMT2-213ENST00000554600 PEX16Q9Y5Y5 336 aa8.6□□□□□ -1.03
SHMT2-213ENST00000554600 UBE2QL1A1L167 161 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 A6NDX4 124 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 TIMM23O14925 209 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 PEX14O75381 377 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 SRMP19623 302 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 CD24P25063 80 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 CD34P28906 385 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 MNDAP41218 407 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 KRTAP10-3P60369 221 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 MLLT11Q13015 90 aaPredicted RBP8.59□□□□□ -1.03
SHMT2-213ENST00000554600 TPBGQ13641 420 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 TRAM1Q15629 374 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 HLA-DRB5Q30154 266 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 NKAPLQ5M9Q1 402 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 LRRTM1Q86UE6 522 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 TMEM104Q8NE00 496 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 PHYHIPQ92561 330 aa8.59□□□□□ -1.03
SHMT2-213ENST00000554600 TOMM40LQ969M1 308 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms