RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ESPL1Q14674 2120 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 IGKV3D-15A0A087WSY6 115 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 IGKV1-6A0A0C4DH72 117 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 C19orf67A6NJJ6 358 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 CD300LBA8K4G0 201 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 ZNF44P15621 663 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 PLP2Q04941 152 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 IZUMO4Q1ZYL8 232 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 AWAT1Q58HT5 328 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 SUMF2Q8NBJ7 301 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 IP6K3Q96PC2 410 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 ARGFXA6NJG6 315 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 H3BP45 60 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 NDUFA2O43678 99 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 CA6P23280 308 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 DCAF10Q5QP82 559 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 OR2G3Q8NGZ4 309 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 ZNF175Q9Y473 711 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 LIPGQ9Y5X9 500 aa13.42□□□□□ -0.26
ARHGEF40-203ENST00000554514 ASPMQ8IZT6 3477 aa13.41□□□□□ -0.26
ARHGEF40-203ENST00000554514 ATP1A1-AS1Q5TC04 95 aa13.41□□□□□ -0.26
ARHGEF40-203ENST00000554514 ARV1Q9H2C2 271 aa13.41□□□□□ -0.26
ARHGEF40-203ENST00000554514 ABI3Q9P2A4 366 aa13.41□□□□□ -0.26
ARHGEF40-203ENST00000554514 LOC400499M0QZD8 3231 aa13.41□□□□□ -0.26
ARHGEF40-203ENST00000554514 LNP1A1A4G5 178 aa13.41□□□□□ -0.26
ARHGEF40-203ENST00000554514 RHBDL1O75783 438 aa13.41□□□□□ -0.26
ARHGEF40-203ENST00000554514 NAPSAO96009 420 aa13.41□□□□□ -0.26
ARHGEF40-203ENST00000554514 KRBOX4Q5JUW0 171 aa13.41□□□□□ -0.26
ARHGEF40-203ENST00000554514 P4HA3Q7Z4N8 544 aa13.41□□□□□ -0.26
ARHGEF40-203ENST00000554514 OR5C1Q8NGR4 320 aa13.41□□□□□ -0.26
ARHGEF40-203ENST00000554514 RARRES2Q99969 163 aa13.41□□□□□ -0.26
ARHGEF40-203ENST00000554514 KPTNQ9Y664 436 aa13.41□□□□□ -0.26
ARHGEF40-203ENST00000554514 ANKRD30BLA7E2S9 258 aa13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 ZNF724A8MTY0 619 aa13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 MEOX1P50221 254 aa13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 POM121L2Q96KW2 1035 aa13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 LINC00470Q9BZP3 86 aa13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 ESRP2Q9H6T0 727 aaKnown RBP13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 SMCO4Q9NRQ5 59 aa13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 COLCA2A8K830 154 aa13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 UMAD1C9J7I0 102 aa13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 WRBO00258 174 aa13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 ATP6V0CP27449 155 aa13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 APLNRP35414 380 aa13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 WNT5AP41221 380 aa13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 RUNX1Q01196 453 aa13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 DEFB123Q8N688 67 aa13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 RNASE11Q8TAA1 199 aaKnown RBP13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 TMEM171Q8WVE6 324 aa13.4□□□□□ -0.26
ARHGEF40-203ENST00000554514 SLC34A2O95436 690 aa13.4□□□□□ -0.27
ARHGEF40-203ENST00000554514 DYNLT3P51808 116 aa13.4□□□□□ -0.27
ARHGEF40-203ENST00000554514 TMEM164Q5U3C3 297 aa13.4□□□□□ -0.27
ARHGEF40-203ENST00000554514 LYPD6BQ8NI32 183 aa13.4□□□□□ -0.27
ARHGEF40-203ENST00000554514 ZPBPQ9BS86 351 aa13.4□□□□□ -0.27
ARHGEF40-203ENST00000554514 BCL2L14Q9BZR8 327 aa13.4□□□□□ -0.27
ARHGEF40-203ENST00000554514 PLSCR2Q9NRY7 297 aa13.4□□□□□ -0.27
ARHGEF40-203ENST00000554514 GLRX2Q9NS18 164 aa13.4□□□□□ -0.27
ARHGEF40-203ENST00000554514 CDS2O95674 445 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 SRPXP78539 464 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 CCL20P78556 96 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 ZNF154Q13106 437 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 CMTM1Q8IZ96 169 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 KIAA2026Q5HYC2 2103 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 KIR2DS1A0A191URI9 304 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 C7orf77A4D0Y5 90 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 CHST1O43916 411 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 TMEM50AO95807 157 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 ARG1P05089 322 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 CBR1P16152 277 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 KIR2DS4P43632 304 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 KIR2DS1Q14954 304 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 NRN1LQ496H8 165 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 SHEQ5VZ18 495 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 DHRS13Q6UX07 377 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 MYPOPQ86VE0 399 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM185AQ8N0U4 392 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 TMEM252Q8N6L7 170 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 BIN3Q9NQY0 253 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 ERRFI1Q9UJM3 462 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 ATP23Q9Y6H3 246 aa13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 DIDO1Q9BTC0 2240 aaKnown RBP13.39□□□□□ -0.27
ARHGEF40-203ENST00000554514 A0A1W2PPH5 198 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 PROB1E7EW31 1015 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 LINC01387J3KSC0 135 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 ZNF16P17020 682 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 CLN3Q13286 438 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 MRPL30Q8TCC3 161 aaKnown RBP13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 OR5P3Q8WZ94 311 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 TMEM56Q96MV1 263 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 SPIN2AQ99865 258 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 SPIN2BQ9BPZ2 258 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 KCNJ16Q9NPI9 418 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 OR1A1Q9P1Q5 309 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 PUS1Q9Y606 427 aaKnown RBP eCLIP13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 TMEM56-RWDD3S4R434 201 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 TRAV24A0A0B4J272 114 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 A6NLC8 198 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 SIRPB1O00241 398 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 ARR3P36575 388 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms