RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 RELL2Q8NC24 303 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-227ENST00000554491 HJURPQ8NCD3 748 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-227ENST00000554491 NPEPL1Q8NDH3 523 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 LFNGQ8NES3 379 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 OR4A4PQ8NGN8 299 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 OR13G1Q8NGZ3 307 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 LGALS14Q8TCE9 139 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 ZNF675Q8TD23 568 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 VN1R17PQ8TDU5 208 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 GPR148Q8TDV2 347 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 ST8SIA1Q92185 356 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 FGF11Q92914 225 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 NAT6Q93015 286 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TSLPQ969D9 159 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 ESAMQ96AP7 390 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 RAB39BQ96DA2 213 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 COQ2Q96H96 371 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 ACY3Q96HD9 319 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 OR10C1Q96KK4 312 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 ZNF582Q96NG8 517 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-227ENST00000554491 CCDC115Q96NT0 180 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 PEBP4Q96S96 227 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 MGLLQ99685 303 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 CHRNA10Q9GZZ6 450 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 CDCP1Q9H5V8 836 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TMEM231Q9H6L2 316 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 MOB1AQ9H8S9 216 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 ZDHHC11Q9H8X9 412 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 MED29Q9NX70 200 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 SPANXCQ9NY87 97 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 FKBP11Q9NYL4 201 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TAS2R8Q9NYW2 309 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 THAP10Q9P2Z0 257 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-227ENST00000554491 MMP17Q9ULZ9 603 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 MRPS16Q9Y3D3 137 aaKnown RBP3.78□□□□□ -1.8
ATXN3-227ENST00000554491 RFNGQ9Y644 331 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 CITO14578 2027 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 CROCCQ5TZA2 2017 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 LRRK1Q38SD2 2015 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 GGT3PA6NGU5 568 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 SLC22A20A6NK97 555 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 FAM183AA6NL82 134 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF878C9JN71 531 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 E9PQ18 207 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 G3V2L1 256 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 BCL2L11O43521 198 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 FGF17O60258 216 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 TOXO94900 526 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 SEMA4FO95754 770 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 CER1O95813 267 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 ORM1P02763 201 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 EDN1P05305 212 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 CSN2P05814 226 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 CTSLP07711 333 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 RAB40ALP0C0E4 278 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 OR4A8P0C604 315 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 SFTA3P0C7M3 94 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 CT45A8P0DMV1 189 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 CT45A9P0DMV2 189 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 OR12D1P0DN82 309 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 CXCL8P10145 99 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 PSG2P11465 335 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 HGFP14210 728 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 CD1DP15813 335 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 RGRP47804 291 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 OR3A4PP47883 348 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 SULT1A1P50225 295 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 ATP4BP51164 291 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 DVL1P1P54792 670 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 PAX9P55771 341 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 CLDN6P56747 220 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 HIST1H3AP68431 136 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 SRPXP78539 464 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 MZT1Q08AG7 82 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 HSD52Q0P140 79 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 SMAGPQ0VAQ4 97 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 RUNX3Q13761 415 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 ELAVL3Q14576 367 aaKnown RBP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 NFATC4Q14934 902 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 MAD2L1BPQ15013 274 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 SLC25A52Q3SY17 297 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 LRRC10Q5BKY1 277 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 CT45A2Q5DJT8 189 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF766Q5HY98 468 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 C6orf136Q5SQH8 315 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 UTF1Q5T230 341 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 OTUD3Q5T2D3 398 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF776Q68DI1 518 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 CD200R1LQ6Q8B3 271 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 GTF2H5Q6ZYL4 71 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 NEGR1Q7Z3B1 354 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 SIAH3Q8IW03 269 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 BEST3Q8N1M1 668 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 ARIH2OSQ8N7S6 290 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 PLPP5Q8NEB5 264 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 OR2Y1Q8NGV0 311 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 OR5B3Q8NH48 314 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF418Q8TF45 676 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 LHX4Q969G2 390 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 PTX4Q96A99 478 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms