RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 IL13RA2Q14627 380 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 KISS1Q15726 138 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 HLA-DRB5Q30154 266 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 ARSJQ5FYB0 599 aaPredicted RBP5.29□□□□□ -1.56
SLIRP-203ENST00000554074 KRBOX4Q5JUW0 171 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 PRAMEF5Q5TYX0 476 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 OR2G6Q5TZ20 316 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 CCDC144NLQ6NUI1 221 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 ZNF529Q6P280 563 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 ZNF773Q6PK81 442 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 SLC16A12Q6ZSM3 486 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 THNSL2Q86YJ6 484 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 C11orf44Q8N8P7 122 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 WFDC9Q8NEX5 89 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 Q8NFD4 153 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 OR4D6Q8NGJ1 314 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 OR51T1Q8NGJ9 327 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 OR13C9Q8NGT0 318 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 OR10AC1Q8NH08 325 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 UFD1Q92890 307 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 RFT1Q96AA3 541 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 R3HDM4Q96D70 268 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 COQ2Q96H96 371 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 RBM14Q96PK6 669 aaKnown RBP5.29□□□□□ -1.56
SLIRP-203ENST00000554074 CITED2Q99967 270 aaPredicted RBP5.29□□□□□ -1.56
SLIRP-203ENST00000554074 CCDC90BQ9GZT6 254 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 LINC00574Q9H8X3 128 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 VCX3AQ9NNX9 186 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 PCDHB16Q9NRJ7 776 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 PAK1IP1Q9NWT1 392 aaPredicted RBP5.29□□□□□ -1.56
SLIRP-203ENST00000554074 CLEC2DQ9UHP7 191 aa5.29□□□□□ -1.56
SLIRP-203ENST00000554074 LSM2Q9Y333 95 aaKnown RBP5.29□□□□□ -1.56
SLIRP-203ENST00000554074 TRBV5-5A0A0J9YX44 114 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 KBTBD11-OT1A0A1B0GTJ5 212 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 BUB1B-PAK6H3BSN5 160 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 TOR1AO14656 332 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 DEGS1O15121 323 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 GPX5O75715 221 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 HCKP08631 526 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 TMEM225BP0DP42 221 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 CPEP16870 476 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 JUNBP17275 347 aaPredicted RBP5.28□□□□□ -1.56
SLIRP-203ENST00000554074 CELP19835 753 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 MNDAP41218 407 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 GLIPR1P48060 266 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 SNU13P55769 128 aaKnown RBP5.28□□□□□ -1.56
SLIRP-203ENST00000554074 MED22Q15528 200 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 C17orf58Q2M2W7 97 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 NSUN5P1Q3KNT7 163 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 Q499Y3 187 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 NHLRC3Q5JS37 347 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 TPTE2P1Q5T6R2 138 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 UBE2UQ5VVX9 321 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 ASCL4Q6XD76 172 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 Q6ZS46 218 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 CDH26Q8IXH8 852 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 ZNF565Q8N9K5 539 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 OR5AU1Q8NGC0 362 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 OR10A7Q8NGE5 316 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 OR5D18Q8NGL1 313 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 OR9G1Q8NH87 305 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 CAPSLQ8WWF8 208 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 GHSRQ92847 366 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 KIRREL1Q96J84 757 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 PGLYRP3Q96LB9 341 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 SPACA5Q96QH8 159 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 MGLLQ99685 303 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 PDCD1LG2Q9BQ51 273 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 SLC25A33Q9BSK2 321 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 MMP28Q9H239 520 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 IFT22Q9H7X7 185 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 ZNF286AQ9HBT8 521 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 ACOT13Q9NPJ3 140 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 NECAP2Q9NVZ3 263 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 CKLFQ9UBR5 152 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 DHDHQ9UQ10 334 aa5.28□□□□□ -1.56
SLIRP-203ENST00000554074 AMMECR1Q9Y4X0 333 aaPredicted RBP5.28□□□□□ -1.56
SLIRP-203ENST00000554074 TRAV24A0A0B4J272 114 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 FAM90A18PA6NE21 464 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 FAM90A16PA6NEW6 464 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 FAM90A20PA6NIJ5 464 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 TRIM64CA6NLI5 447 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 FAM90A9PA6NNJ1 464 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 FAM90A12PA8MX19 464 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 FAM90A5PA8MXJ8 464 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 NPIPB11E5RHQ5 1161 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 E9PI62 339 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 MAGEB3O15480 346 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 IL1AP01583 271 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 AMY1AP04745 511 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 AMY2AP04746 511 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 FAM90A15PP0C7V4 464 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 FAM90A13PP0C7W8 464 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 FAM90A14PP0C7W9 464 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 FAM90A24PP0C7X0 464 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 FAM106CPP0CH98 169 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 CALCBP10092 127 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 FSTP19883 344 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 RAB3AP20336 220 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 GDNFP39905 211 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms