RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 FBP1P09467 338 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 GIG44P09565 113 aaPredicted RBP1.55□□□□□ -2.16
SRP54-204ENST00000553923 OR4Q2P0C623 313 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 OR56A5P0C7T3 313 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 SEC11BP0C7V7 166 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 CECR9P0C854 216 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 P0C879 139 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 UCHL3P15374 230 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 CD36P16671 472 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 MYL12AP19105 171 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 GADD45AP24522 165 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 IL3RAP26951 378 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 SLC6A1P30531 599 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 CTRLP40313 264 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 EIF1P41567 113 aaKnown RBP1.55□□□□□ -2.16
SRP54-204ENST00000553923 CCR6P51684 374 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 MP68P56378 58 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 RPL19P84098 196 aaKnown RBP1.55□□□□□ -2.16
SRP54-204ENST00000553923 C16orf72Q14CZ0 275 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 HIST3H3Q16695 136 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 ZNF404Q494X3 552 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 C2orf83Q53S99 150 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 FAM162BQ5T6X4 162 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 TSPO2Q5TGU0 170 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 ELP2Q6IA86 826 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 ZNF530Q6P9A1 599 aaPredicted RBP1.55□□□□□ -2.16
SRP54-204ENST00000553923 LYPD2Q6UXB3 125 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 FA2HQ7L5A8 372 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 TCF23Q7RTU1 214 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 ATP5L2Q7Z4Y8 100 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 RIMKLAQ8IXN7 391 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 OR6V1Q8N148 313 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 MUC15Q8N387 334 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 TBC1D19Q8N5T2 526 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 LINC00337Q8N6G1 96 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 OR10D3Q8NH80 312 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 ZNRF2Q8NHG8 242 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 TEX47Q8TBZ9 253 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 C2orf15Q8WU43 125 aaKnown RBP1.55□□□□□ -2.16
SRP54-204ENST00000553923 FAM172AQ8WUF8 416 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 ORAOV1Q8WV07 137 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 PHYHIPLQ96FC7 376 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 DCUN1D1Q96GG9 259 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 RNF157Q96PX1 679 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 SIGMAR1Q99720 223 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 MARVELD1Q9BSK0 173 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 ULBP3Q9BZM4 244 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 LINC00597Q9H2U6 94 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 OR52D1Q9H346 318 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 VSIRQ9H7M9 311 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 PLSCR3Q9NRY6 295 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 PAQR5Q9NXK6 330 aaPredicted RBP1.55□□□□□ -2.16
SRP54-204ENST00000553923 VNN3Q9NY84 501 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 OR12D3Q9UGF7 316 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 FBXO5Q9UKT4 447 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 RAB26Q9ULW5 256 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 POLR1DQ9Y2S0 133 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 FAM32AQ9Y421 112 aaKnown RBP1.55□□□□□ -2.16
SRP54-204ENST00000553923 ARL5AQ9Y689 179 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 ZBED9Q6R2W3 1325 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 WDR62O43379 1518 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 IGHV2-26A0A0B4J1V2 119 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 IGHV1OR15-9A0A0B4J2B8 117 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 CCL15-CCL14A0A0B4J2E2 113 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 IGHV5-51A0A0C4DH38 117 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 IGHV3-66A0A0C4DH42 116 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 GMNCA6NCL1 334 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 ARGFXA6NJG6 315 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 CD300LBA8K4G0 201 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 BTNL10A8MVZ5 291 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 B4DEV8 164 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 LGALS9O00182 355 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 FFAR1O14842 300 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 ANGPTL7O43827 346 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 FADS1O60427 444 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 PLIN3O60664 434 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 SCO1O75880 301 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 YIF1AO95070 293 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 EPPINO95925 133 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 CXorf1O96002 111 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 CA2P00918 260 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 CD5P06127 495 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 ZNF688P0C7X2 276 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 ZNF17P17021 662 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 ORM2P19652 201 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 ALOX5APP20292 161 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 IMPA1P29218 277 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 NUDT1P36639 197 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 TGFBR2P37173 567 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 H2BFSP57053 126 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 ARPC4P59998 168 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 GABARAPL2P60520 117 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 NAA20P61599 178 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 DAD1P61803 113 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 DEFA6Q01524 100 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 PRDX4Q13162 271 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 OR2F1Q13607 317 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 JOSD1Q15040 202 aaPredicted RBP1.54□□□□□ -2.16
SRP54-204ENST00000553923 PAFAH1B3Q15102 231 aaKnown RBP1.54□□□□□ -2.16
SRP54-204ENST00000553923 ELOCQ15369 112 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms