RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 EPHA1P21709 976 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 CDKN1BP46527 198 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 RBX1P62877 108 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 CCL20P78556 96 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 IL13RA2Q14627 380 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 C5orf24Q7Z6I8 188 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 GSX1Q9H4S2 264 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-207ENST00000553837 GLRX2Q9NS18 164 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 ZDBF2Q9HCK1 2354 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 CDRT15L2A8MXV6 281 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 OTX1P32242 354 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-207ENST00000553837 FOLR3P41439 243 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 KISS1Q15726 138 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 SNAI3Q3KNW1 292 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 GJC3Q8NFK1 279 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 ADGRG7Q96K78 797 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 GPER1Q99527 375 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 OR10A2Q9H208 303 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 TMEM242Q9NWH2 141 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 V9GYS6 101 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 FOXI3A8MTJ6 420 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-207ENST00000553837 CER1O95813 267 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 PRSS12P56730 875 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 MAJINQ3KP22 176 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 ABLIM2Q6H8Q1 611 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 SPSB3Q6PJ21 355 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 CLEC2AQ6UVW9 174 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 TIPARPQ7Z3E1 657 aaKnown RBP10.58□□□□□ -0.72
SHMT2-207ENST00000553837 THNSL2Q86YJ6 484 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 TMEM183AQ8IXX5 376 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 C20orf196Q8IYI0 205 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 TMEM105Q8N8V8 129 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 WSB1Q9Y6I7 421 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 SCAF4O95104 1147 aaKnown RBP10.58□□□□□ -0.72
SHMT2-207ENST00000553837 GCGP01275 180 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 OTX2P32243 289 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 DUSP3P51452 185 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-207ENST00000553837 HLA-DRB3P79483 266 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 TLE4Q04727 773 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 SLC16A14Q7RTX9 510 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 GGNQ86UU5 652 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 FAM89BQ8N5H3 189 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 OR51T1Q8NGJ9 327 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 OR2G3Q8NGZ4 309 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 ZNF2Q9BSG1 426 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-207ENST00000553837 GPR87Q9BY21 358 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 DEPPQ9NTK1 212 aa10.58□□□□□ -0.72
SHMT2-207ENST00000553837 YLPM1P49750 1951 aaKnown RBP10.57□□□□□ -0.72
SHMT2-207ENST00000553837 FAM230AA0A1W2PPH8 454 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 LRRC3CA6NJW4 275 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 DHRS3O75911 302 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 VAMP5O95183 116 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 DIRAS3O95661 229 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 PATE4P0C8F1 98 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 PGA5P0DJD9 388 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 CLDN15P56746 228 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 ZNF266Q14584 549 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 ICAM4Q14773 271 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 ARL6IP1Q15041 203 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 C4orf17Q53FE4 359 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 ZNF506Q5JVG8 444 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 DMRTA1Q5VZB9 504 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 FBXW9Q5XUX1 488 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 SLC23A3Q6PIS1 610 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 ZNF573Q86YE8 665 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 C1orf210Q8IVY1 113 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 CYB561D1Q8N8Q1 229 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 PIGTQ969N2 578 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 ULBP2Q9BZM5 246 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 PADI1Q9ULC6 663 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 PIGLQ9Y2B2 252 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 LIPGQ9Y5X9 500 aa10.57□□□□□ -0.72
SHMT2-207ENST00000553837 A0A0U1RQV5 110 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 A0A1W2PN81 502 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 PINLYPA6NC86 204 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 CLDN34H7C241 214 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 M0R135 149 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 RRP8O43159 456 aaKnown RBP10.56□□□□□ -0.72
SHMT2-207ENST00000553837 ST8SIA3O43173 380 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 XRCC2O43543 280 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 DFFBO76075 338 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 HNF1AP20823 631 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 DUSP1P28562 367 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 CHRNA7P36544 502 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 RND2P52198 227 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 CARD18P57730 90 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 ZXDAP98168 799 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 RTL6Q6ICC9 239 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 ZFP62Q8NB50 900 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-207ENST00000553837 OR2AE1Q8NHA4 323 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 ZNF799Q96GE5 643 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 SNX22Q96L94 193 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 PLEK2Q9NYT0 353 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 CELSR3Q9NYQ7 3312 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 ZNF716A6NP11 495 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 SERPINE3A8MV23 424 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 MSTNO14793 375 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 OR5AC1P0C628 307 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 FCGR2AP12318 317 aa10.56□□□□□ -0.72
SHMT2-207ENST00000553837 GUCA1AP43080 201 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms