RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	CLN8	Q9UBY8	286 aa		3.87	□□□□□ -1.79
ATXN3-222	ENST00000553570	OR5V1	Q9UGF6	321 aa		3.87	□□□□□ -1.79
ATXN3-222	ENST00000553570	NUFIP1	Q9UHK0	495 aa	Known RBP	3.87	□□□□□ -1.79
ATXN3-222	ENST00000553570	ZNF391	Q9UJN7	358 aa		3.87	□□□□□ -1.79
ATXN3-222	ENST00000553570	RRP15	Q9Y3B9	282 aa	Known RBP	3.87	□□□□□ -1.79
ATXN3-222	ENST00000553570	ZAN	Q9Y493	2812 aa		3.87	□□□□□ -1.79
ATXN3-222	ENST00000553570	LOC105371242	A0A075B767	164 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570		A0A096LNT2	108 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570		A0A0G2JMP0	313 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570		A0A0X1KG70	313 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570		A0A1B0GTI1	187 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	LOC107986453	A0A1B0GWG9	222 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570		A0A1W2PPK0	400 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	EFCAB10	A6NFE3	127 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	OOEP	A6NGQ2	149 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	TMEM210	A6NLX4	147 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	CEACAM18	A8MTB9	384 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570		E9PI62	339 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570		H0YAE9	185 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	TRAPPC2L	H3BP13	241 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	LGALS8	O00214	317 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	DLGAP1	O14490	977 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	DVL1	O14640	695 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	MYL12B	O14950	172 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	CASQ2	O14958	399 aa	Predicted RBP	3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	MAGEB3	O15480	346 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	RHBDL1	O75783	438 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	NXPH2	O95156	264 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	ATP6V1G2	O95670	118 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	UBC	P0CG48	685 aa	Known RBP	3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	HSMCR30	P0CW71	290 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	ATP6V1B1	P15313	513 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	PCMT1	P22061	227 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	DCK	P27707	260 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	GABRA5	P31644	462 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	MC5R	P33032	325 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	PITPNB	P48739	271 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	POU3F4	P49335	361 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	FUT6	P51993	359 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	DVL1P1	P54792	670 aa	Predicted RBP	3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	RIPPLY3	P57055	190 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	SNRPE	P62304	92 aa	Known RBP	3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	GAGE2B	Q13066	116 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	IL18R1	Q13478	541 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	GAGE2E	Q4V326	116 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	GAGE2A	Q6NT46	116 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	BTNL3	Q6UXE8	466 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	WDR82	Q6UXN9	313 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	IZUMO2	Q6UXV1	221 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	WDR86	Q86TI4	376 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	ZNF573	Q86YE8	665 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	C11orf53	Q8IXP5	236 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	PDZD9	Q8IXQ8	264 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	OR4M2	Q8NGB6	313 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	OR5D14	Q8NGL3	314 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	OR52I2	Q8NH67	350 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	ZFAND2B	Q8WV99	257 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	C22orf15	Q8WYQ4	148 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	MYDGF	Q969H8	173 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	SLAMF9	Q96A28	289 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	PELI1	Q96FA3	418 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	BORCS8	Q96FH0	119 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	MED30	Q96HR3	178 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	SPACA5	Q96QH8	159 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	PDCD1LG2	Q9BQ51	273 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	WDR13	Q9H1Z4	485 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	MOB1A	Q9H8S9	216 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	ABCB9	Q9NP78	766 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	FGF20	Q9NP95	211 aa	Predicted RBP	3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	MMP26	Q9NRE1	261 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	BABAM2	Q9NXR7	383 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	ONECUT1	Q9UBC0	465 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	GAGE2D	Q9UEU5	116 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	CLEC2D	Q9UHP7	191 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	HHLA2	Q9UM44	414 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	ING4	Q9UNL4	249 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	ERGIC3	Q9Y282	383 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	EXOSC1	Q9Y3B2	195 aa	Known RBP	3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	TPRKB	Q9Y3C4	175 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	OR2W1	Q9Y3N9	320 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	AUP1	Q9Y679	476 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570		V9GYS6	101 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	C2CD3	Q4AC94	2353 aa		3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	NIPBL	Q6KC79	2804 aa	eCLIP	3.86	□□□□□ -1.79
ATXN3-222	ENST00000553570	CSMD1	Q96PZ7	3565 aa		3.85	□□□□□ -1.79
ATXN3-222	ENST00000553570		A0A1W2PRD5	423 aa		3.85	□□□□□ -1.79
ATXN3-222	ENST00000553570		A0A1W2PRF3	423 aa		3.85	□□□□□ -1.79
ATXN3-222	ENST00000553570		A0A1W2PRM7	423 aa		3.85	□□□□□ -1.79
ATXN3-222	ENST00000553570	MEX3A	A1L020	520 aa	Known RBP	3.85	□□□□□ -1.79
ATXN3-222	ENST00000553570	NKX6-3	A6NJ46	265 aa		3.85	□□□□□ -1.79
ATXN3-222	ENST00000553570	OR5B21	A6NL26	309 aa		3.85	□□□□□ -1.79
ATXN3-222	ENST00000553570	OR2AT4	A6NND4	320 aa		3.85	□□□□□ -1.79
ATXN3-222	ENST00000553570		J3QRE1	110 aa		3.85	□□□□□ -1.79
ATXN3-222	ENST00000553570	NDUFA2	O43678	99 aa		3.85	□□□□□ -1.79
ATXN3-222	ENST00000553570	SYNGR1	O43759	233 aa		3.85	□□□□□ -1.79
ATXN3-222	ENST00000553570	SRSF10	O75494	262 aa	Known RBP	3.85	□□□□□ -1.79
ATXN3-222	ENST00000553570	GATB	O75879	557 aa	Known RBP	3.85	□□□□□ -1.79
ATXN3-222	ENST00000553570	CCDC159	P0C7I6	412 aa		3.85	□□□□□ -1.79
ATXN3-222	ENST00000553570	LIMS3	P0CW19	117 aa		3.85	□□□□□ -1.79
ATXN3-222	ENST00000553570	LIMS4	P0CW20	117 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms