RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 F12P00748 615 aaPredicted RBP11.46□□□□□ -0.57
APEX1-205ENST00000553555 TK1P04183 234 aa11.46□□□□□ -0.57
APEX1-205ENST00000553555 DAOP14920 347 aa11.46□□□□□ -0.57
APEX1-205ENST00000553555 ARPC4P59998 168 aa11.46□□□□□ -0.57
APEX1-205ENST00000553555 CDK10Q15131 360 aa11.46□□□□□ -0.57
APEX1-205ENST00000553555 ZMYND11Q15326 602 aa11.46□□□□□ -0.57
APEX1-205ENST00000553555 PLET1Q6UQ28 207 aa11.46□□□□□ -0.57
APEX1-205ENST00000553555 OVCH2Q7RTZ1 564 aa11.46□□□□□ -0.57
APEX1-205ENST00000553555 OR5D13Q8NGL4 314 aa11.46□□□□□ -0.57
APEX1-205ENST00000553555 CCDC107Q8WV48 283 aa11.46□□□□□ -0.57
APEX1-205ENST00000553555 A0A1B0GW55 424 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 TMEM30CPA0ZSE6 113 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 TRDCB7Z8K6 153 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 SIGLEC5O15389 551 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 IFNA6P05013 189 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 GSTT2P0CG29 244 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 DUX4L2P0CJ85 424 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 DUX4L3P0CJ86 424 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 DUX4L4P0CJ87 422 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 DUX4L5P0CJ88 424 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 DUX4L6P0CJ89 424 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 DUX4L7P0CJ90 424 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 RCC1P18754 421 aaPredicted RBP11.46□□□□□ -0.58
APEX1-205ENST00000553555 BTG1P62324 171 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 KRBOX4Q5JUW0 171 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 DUX4L9Q6RFH8 374 aaPredicted RBP11.46□□□□□ -0.58
APEX1-205ENST00000553555 CADM3Q8N126 398 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 MED30Q96HR3 178 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 FAM234AQ9H0X4 552 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 SLC2A8Q9NY64 477 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 DUX4Q9UBX2 424 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 KIF25Q9UIL4 384 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 SCP2D1Q9UJQ7 156 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 TRAPPC2LQ9UL33 140 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 NUBP2Q9Y5Y2 271 aa11.46□□□□□ -0.58
APEX1-205ENST00000553555 SPG11Q96JI7 2443 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 ARID1AO14497 2285 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 KIR2DS1A0A191URI9 304 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 NKX6-3A6NJ46 265 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 SDCBPO00560 298 aaPredicted RBP11.45□□□□□ -0.58
APEX1-205ENST00000553555 NDUFA2O43678 99 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 NDUFS7O75251 213 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 SELLP14151 372 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 COL8A1P27658 744 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 KIR2DS4P43632 304 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 GLIPR1P48060 266 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 EFNA4P52798 201 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 IL13RA1P78552 427 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 KIR2DS1Q14954 304 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 KCNJ8Q15842 424 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 BTN2A1Q7KYR7 527 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 MOB1BQ7L9L4 216 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 C5orf24Q7Z6I8 188 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 ARRDC1Q8N5I2 433 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 FAM216BQ8N7L0 139 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 PRRT1Q99946 306 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 TMEM246Q9BRR3 403 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 MARVELD1Q9BSK0 173 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 MBNL3Q9NUK0 354 aaKnown RBP11.45□□□□□ -0.58
APEX1-205ENST00000553555 EHFQ9NZC4 300 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 MGAT4AQ9UM21 535 aa11.45□□□□□ -0.58
APEX1-205ENST00000553555 YLPM1P49750 1951 aaKnown RBP11.44□□□□□ -0.58
APEX1-205ENST00000553555 TRAV39A0A0B4J263 110 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 TMPRSS2O15393 492 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 FABP7O15540 132 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 NDUFB6O95139 128 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 IGHV2-70P01814 119 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 SCTP09683 121 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 SCGB2B2Q4G0G5 96 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 LYPD2Q6UXB3 125 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 IDO2Q6ZQW0 420 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 SLC36A1Q7Z2H8 476 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 PEG10Q86TG7 708 aaKnown RBP11.44□□□□□ -0.58
APEX1-205ENST00000553555 TMEM185AQ8NFB2 350 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 CREB3L1Q96BA8 519 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 UPRTQ96BW1 309 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 C14orf79Q96F83 325 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 CCL19Q99731 98 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 NCOR1P1Q9H4R4 102 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 NECAP2Q9NVZ3 263 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 KAAG1Q9UBP8 84 aa11.44□□□□□ -0.58
APEX1-205ENST00000553555 MEIKINA0A087WXM9 373 aa11.43□□□□□ -0.58
APEX1-205ENST00000553555 INMT-MINDY4F8WBC2 141 aa11.43□□□□□ -0.58
APEX1-205ENST00000553555 ADAM20O43506 726 aa11.43□□□□□ -0.58
APEX1-205ENST00000553555 OR5H8P0DN80 308 aa11.43□□□□□ -0.58
APEX1-205ENST00000553555 ERP29P30040 261 aaKnown RBP11.43□□□□□ -0.58
APEX1-205ENST00000553555 TMEM33P57088 247 aa11.43□□□□□ -0.58
APEX1-205ENST00000553555 TSPAN5P62079 268 aa11.43□□□□□ -0.58
APEX1-205ENST00000553555 HLA-DRB3P79483 266 aa11.43□□□□□ -0.58
APEX1-205ENST00000553555 EDDM3AQ14507 147 aa11.43□□□□□ -0.58
APEX1-205ENST00000553555 RBMS2Q15434 407 aaKnown RBP11.43□□□□□ -0.58
APEX1-205ENST00000553555 IGSF11Q5DX21 431 aa11.43□□□□□ -0.58
APEX1-205ENST00000553555 DHRS11Q6UWP2 260 aa11.43□□□□□ -0.58
APEX1-205ENST00000553555 TMEM17Q86X19 198 aa11.43□□□□□ -0.58
APEX1-205ENST00000553555 TPRX1Q8N7U7 411 aa11.43□□□□□ -0.58
APEX1-205ENST00000553555 OR4A4PQ8NGN8 299 aa11.43□□□□□ -0.58
APEX1-205ENST00000553555 OR13C8Q8NGS7 320 aa11.43□□□□□ -0.58
APEX1-205ENST00000553555 RAB1CQ92928 201 aa11.43□□□□□ -0.58
APEX1-205ENST00000553555 SLC25A21Q9BQT8 299 aaPredicted RBP11.43□□□□□ -0.58
APEX1-205ENST00000553555 GINS4Q9BRT9 223 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms