RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 FUOMA2VDF0 154 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 C3orf84H3BNL1 204 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 DEGS1O15121 323 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 RGS10O43665 173 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 GPX5O75715 221 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 CD1AP06126 327 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 CGB3P0DN86 165 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 CGB7P0DN87 165 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 ZNF44P15621 663 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 DYNLT3P51808 116 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 RPS11P62280 158 aaKnown RBP eCLIP9.45□□□□□ -0.9
SRP54-203ENST00000553544 AESQ08117 197 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 PLA1AQ53H76 456 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 MINOS1Q5TGZ0 78 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 HEPN1Q6WQI6 88 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 Q6ZS46 218 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 GHSRQ92847 366 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 FOXRED1Q96CU9 486 aaPredicted RBP9.45□□□□□ -0.9
SRP54-203ENST00000553544 COQ2Q96H96 371 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 PGLYRP3Q96LB9 341 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 CNBD2Q96M20 576 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 TMEM138Q9NPI0 162 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 MINOS1-NBL1R4GNA1 71 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 U3KQK5 164 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 TRGV10A0A0A0MS01 117 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 TRAV24A0A0B4J272 114 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 ODAMA1E959 279 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 PTGES3LE9PB15 166 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 MRPS14O60783 128 aaKnown RBP9.44□□□□□ -0.9
SRP54-203ENST00000553544 IGFBP3P17936 291 aaPredicted RBP9.44□□□□□ -0.9
SRP54-203ENST00000553544 C21orf33P30042 268 aaPredicted RBP9.44□□□□□ -0.9
SRP54-203ENST00000553544 HOXD3P31249 432 aaPredicted RBP9.44□□□□□ -0.9
SRP54-203ENST00000553544 PTGFRP43088 359 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 RANBP1P43487 201 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 PAX5Q02548 391 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 SCN1BQ07699 218 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 IL13RA2Q14627 380 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 SSX2Q16385 188 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 Q499Y3 187 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 LCE2DQ5TA82 110 aaPredicted RBP9.44□□□□□ -0.9
SRP54-203ENST00000553544 PRSS48Q7RTY5 328 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 SATL1Q86VE3 508 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 MS4A15Q8N5U1 240 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 NANOGP1Q8N7R0 232 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 OR4P4Q8NGL7 312 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 OR13C5Q8NGS8 318 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 TNFAIP8L1Q8WVP5 186 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 ORAI1Q96D31 301 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 GPER1Q99527 375 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 CLEC7AQ9BXN2 247 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 GAL3ST2Q9H3Q3 398 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 NCOR1P1Q9H4R4 102 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 PCDHB16Q9NRJ7 776 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 IL36GQ9NZH8 169 aa9.44□□□□□ -0.9
SRP54-203ENST00000553544 ZMAT5Q9UDW3 170 aaKnown RBP9.44□□□□□ -0.9
SRP54-203ENST00000553544 DNAH9Q9NYC9 4486 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 A0A087X0M5 115 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 A0A1B0GX30 115 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 IGLV1-47P01700 117 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 CDK2P24941 298 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 PSMA1P25786 263 aaKnown RBP9.43□□□□□ -0.9
SRP54-203ENST00000553544 CD34P28906 385 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 BDKRB2P30411 391 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 ZNF93P35789 620 aaPredicted RBP9.43□□□□□ -0.9
SRP54-203ENST00000553544 GDNFP39905 211 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 OR3A4PP47883 348 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 GABARAPL2P60520 117 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 DYNC1I2Q13409 638 aaKnown RBP9.43□□□□□ -0.9
SRP54-203ENST00000553544 GPR50Q13585 617 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 DOC2BQ14184 412 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 SPHARQ15513 63 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 MED22Q15528 200 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 TRAM1Q15629 374 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 C17orf58Q2M2W7 97 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 NHLRC3Q5JS37 347 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 KRBOX4Q5JUW0 171 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 OR52W1Q6IF63 320 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 BAIAP2L2Q6UXY1 529 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 TRAPPC6BQ86SZ2 158 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 RTN4RL2Q86UN3 420 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 SVOPQ8N4V2 548 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 OR10K1Q8NGX5 313 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 UFD1Q92890 307 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 S100A13Q99584 98 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 CCDC90BQ9GZT6 254 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 PPIL3Q9H2H8 161 aaKnown RBP9.43□□□□□ -0.9
SRP54-203ENST00000553544 DUSP21Q9H596 190 aa9.43□□□□□ -0.9
SRP54-203ENST00000553544 PAK1IP1Q9NWT1 392 aaPredicted RBP9.43□□□□□ -0.9
SRP54-203ENST00000553544 TRBV5-7A0A0A0MS05 114 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 ZNF729A6NN14 1252 aaPredicted RBP9.42□□□□□ -0.9
SRP54-203ENST00000553544 FAM90A22PA8MWA6 464 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 DENRO43583 198 aaKnown RBP9.42□□□□□ -0.9
SRP54-203ENST00000553544 CDRT1O95170 752 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 JUNBP17275 347 aaPredicted RBP9.42□□□□□ -0.9
SRP54-203ENST00000553544 CELP19835 753 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 FSTP19883 344 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 CRHBPP24387 322 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 HTR1DP28221 377 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 ATXN7L3Q14CW9 347 aaPredicted RBP9.42□□□□□ -0.9
SRP54-203ENST00000553544 RSU1Q15404 277 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms