RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 SULT1C4O75897 302 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 IGHG4P01861 327 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 OR2T7P0C7T2 308 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 OCM2P0CE71 109 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 OCMP0CE72 109 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-209ENST00000553308 VDAC1P21796 283 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 PSMB8P28062 276 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 HTR1FP30939 366 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 ISL1P61371 349 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 PAN3Q58A45 887 aaKnown RBP7.07□□□□□ -1.28
SYNE2-209ENST00000553308 RSBN1Q5VWQ0 802 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-209ENST00000553308 FAM53AQ6NSI3 398 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-209ENST00000553308 FAM220AQ7Z4H9 259 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 AQP12AQ8IXF9 295 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 SAXO1Q8IYX7 474 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 ZNF565Q8N9K5 539 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 OR51A4Q8NGJ6 313 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 OR2G2Q8NGZ5 317 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 PLPPR1Q8TBJ4 325 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 UTP4Q969X6 686 aaKnown RBP7.07□□□□□ -1.28
SYNE2-209ENST00000553308 NSL1Q96IY1 281 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 NR1H4Q96RI1 486 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-209ENST00000553308 CITED4Q96RK1 184 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 MBOAT4Q96T53 435 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 GNB4Q9HAV0 340 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 PLSCR3Q9NRY6 295 aa7.07□□□□□ -1.28
SYNE2-209ENST00000553308 WARS2Q9UGM6 360 aaKnown RBP7.07□□□□□ -1.28
SYNE2-209ENST00000553308 TRAV24A0A0B4J272 114 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 ZNF736B4DX44 427 aaPredicted RBP7.06□□□□□ -1.28
SYNE2-209ENST00000553308 GAPDHP04406 335 aaKnown RBP7.06□□□□□ -1.28
SYNE2-209ENST00000553308 OR8U8P0C7N1 319 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 TMEM225BP0DP42 221 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 SPNP16150 400 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 C21orf33P30042 268 aaPredicted RBP7.06□□□□□ -1.28
SYNE2-209ENST00000553308 INSL3P51460 131 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 NANOS3P60323 173 aaKnown RBP7.06□□□□□ -1.28
SYNE2-209ENST00000553308 ZP1P60852 638 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 GNB1P62873 340 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 ZNF85Q03923 595 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 ZSCAN26Q16670 478 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 FAM27D1Q5T7N8 215 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 TMEM244Q5VVB8 128 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 SPATA24Q86W54 205 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 TMEM104Q8NE00 496 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 OR13C3Q8NGS6 347 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 OR2T10Q8NGZ9 312 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 MYOZ3Q8TDC0 251 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 RNFT2Q96EX2 444 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 KCTD7Q96MP8 289 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 OR5B12Q96R08 314 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 S1PR3Q99500 378 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 RASL11BQ9BPW5 248 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 KLK15Q9H2R5 256 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 NCOR1P1Q9H4R4 102 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 ZMAT4Q9H898 229 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 RHOFQ9HBH0 211 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 KRT84Q9NSB2 600 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 FRRS1LQ9P0K9 344 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 ZNF581Q9P0T4 197 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 MYRFQ9Y2G1 1151 aa7.06□□□□□ -1.28
SYNE2-209ENST00000553308 HUWE1Q7Z6Z7 4374 aaKnown RBP7.05□□□□□ -1.28
SYNE2-209ENST00000553308 TRIM64CA6NLI5 447 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 I3L521 148 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 SAP30O75446 220 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 FAM107AO95990 144 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 MOSP00540 346 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 MT-ND2P03891 347 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 ISG15P05161 165 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 T-ENOLP0DO92 83 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 GP9P14770 177 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 CALB2P22676 271 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 SOX6P35712 828 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 ATP6V1E1P36543 226 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 MTNR1BP49286 362 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 F2RL1P55085 397 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 ZNF616Q08AN1 781 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 KIAA0141Q14154 515 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-209ENST00000553308 LPCAT4Q643R3 524 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 SLC16A12Q6ZSM3 486 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 ZNF429Q86V71 674 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 FAM71E2Q8N5Q1 922 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 OR10A7Q8NGE5 316 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 OR1N2Q8NGR9 330 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 UBALD1Q8TB05 177 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 CNIH3Q8TBE1 160 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 RTN4IP1Q8WWV3 396 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-209ENST00000553308 DCUN1D4Q92564 292 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 NRBF2Q96F24 287 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 THTPAQ9BU02 230 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 BARHL1Q9BZE3 327 aa7.05□□□□□ -1.28
SYNE2-209ENST00000553308 IGHV3-43A0A0B4J1X8 118 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 G3V318 75 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 OVOL1O14753 267 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 IGF1P05019 195 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 IGHV3-43DP0DP04 118 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 SLC2A2P11168 524 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-209ENST00000553308 DBTP11182 482 aaKnown RBP7.04□□□□□ -1.28
SYNE2-209ENST00000553308 HOXB6P17509 224 aaKnown RBP7.04□□□□□ -1.28
SYNE2-209ENST00000553308 CD1BP29016 333 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 GYS2P54840 703 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms