RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 LYG2Q86SG7 212 aa16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 SEBOXQ9HB31 216 aaPredicted RBP16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 C9orf170A2RU37 121 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 ANXA3P12429 323 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 PRDX2P32119 198 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 ECI1P42126 302 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 C2orf68Q2NKX9 166 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 TMEM128Q5BJH2 165 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 BOLLQ8N9W6 283 aaKnown RBP16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 TMEM204Q9BSN7 226 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 SHARPINQ9H0F6 387 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 MBNL3Q9NUK0 354 aaKnown RBP16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 RNF7Q9UBF6 113 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 SLC23A1Q9UHI7 598 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 CACNA1DQ01668 2161 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 PKDREJQ9NTG1 2253 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 CLDN14O95500 239 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 NFYAP23511 347 aaPredicted RBP16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 OR3A1P47881 315 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 TAS2R31P59538 309 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 TGIF2LYQ8IUE0 185 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 OR2AK2Q8NG84 335 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 DHRS9Q9BPW9 319 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 ZNF436Q9C0F3 470 aaPredicted RBP16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 CISD1Q9NZ45 108 aaKnown RBP16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 MGAT4CQ9UBM8 478 aa16.4■□□□□ 0.22
RBFOX1-215ENST00000553186 IGHV3OR15-7A0A075B7D8 119 aa16.39■□□□□ 0.21
RBFOX1-215ENST00000553186 TRAV39A0A0B4J263 110 aa16.39■□□□□ 0.21
RBFOX1-215ENST00000553186 SMLR1H3BR10 107 aa16.39■□□□□ 0.21
RBFOX1-215ENST00000553186 ZNF737O75373 536 aa16.39■□□□□ 0.21
RBFOX1-215ENST00000553186 IL13RA1P78552 427 aa16.39■□□□□ 0.21
RBFOX1-215ENST00000553186 FAM209AQ5JX71 171 aa16.39■□□□□ 0.21
RBFOX1-215ENST00000553186 FAM201AQ5SY85 155 aa16.39■□□□□ 0.21
RBFOX1-215ENST00000553186 C12orf45Q8N5I9 185 aaPredicted RBP16.39■□□□□ 0.21
RBFOX1-215ENST00000553186 FAM222BQ8WU58 562 aa16.39■□□□□ 0.21
RBFOX1-215ENST00000553186 MOB3AQ96BX8 217 aa16.39■□□□□ 0.21
RBFOX1-215ENST00000553186 FXYD6Q9H0Q3 95 aa16.39■□□□□ 0.21
RBFOX1-215ENST00000553186 DNAJB11Q9UBS4 358 aa16.39■□□□□ 0.21
RBFOX1-215ENST00000553186 PPP1R3CQ9UQK1 317 aa16.39■□□□□ 0.21
RBFOX1-215ENST00000553186 TNFRSF1AP19438 455 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 GLP1RP43220 463 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 KCNJ3P48549 501 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 HLA-DRB3P79483 266 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 TESK1Q15569 626 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 MOB1BQ7L9L4 216 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 COQ2Q96H96 371 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 CYB5R3P00387 301 aaPredicted RBP16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 C1QBP02746 253 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 CTXN2P0C2S0 81 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 PGAM2P15259 253 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 RPS2P15880 293 aaKnown RBP16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 AADACP22760 399 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 SEC61A1P61619 476 aaKnown RBP16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 SUPT4H1P63272 117 aaKnown RBP16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 SLC35E4Q6ICL7 350 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 UXS1Q8NBZ7 420 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 OR4A4PQ8NGN8 299 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 MITD1Q8WV92 249 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 PIK3IP1Q96FE7 263 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 DLL4Q9NR61 685 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 PIPOXQ9P0Z9 390 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 TRAPPC2LQ9UL33 140 aa16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 SPTBN1Q01082 2364 aaKnown RBP16.38■□□□□ 0.21
RBFOX1-215ENST00000553186 HCFC1P51610 2035 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 B9A039 149 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 BET1O15155 118 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 PPYP01298 95 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 TK1P04183 234 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 CTSDP07339 412 aaPredicted RBP16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 VAMP1P23763 118 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 AESQ08117 197 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 ZNF672Q499Z4 452 aaPredicted RBP16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 NOXA1Q86UR1 476 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 ANGPTL6Q8NI99 470 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 CABLES2Q9BTV7 478 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 DCAF16Q9NXF7 216 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 TMEM30CPA0ZSE6 113 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 TUSC2O75896 110 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 OR2A4O95047 310 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 DUS4LO95620 317 aaKnown RBP16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 H2BFSP57053 126 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 PAX5Q02548 391 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 SWI5Q1ZZU3 235 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 NLRC3Q7RTR2 1065 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 ASCC1Q8N9N2 400 aaKnown RBP16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 TOMM40LQ969M1 308 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 BBC3Q96PG8 261 aaPredicted RBP16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 OR2A7Q96R45 310 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 MS4A5Q9H3V2 200 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 MGAT4AQ9UM21 535 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 PCDHB10Q9UN67 800 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 ZFYVE26Q68DK2 2539 aa16.37■□□□□ 0.21
RBFOX1-215ENST00000553186 ZNF728P0DKX0 622 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 CD80P33681 288 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 GZMKP49863 264 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 UCP3P55916 312 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 FXYD4P59646 89 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 KCNJ8Q15842 424 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 OR11L1Q8NGX0 322 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 TRAF4Q9BUZ4 470 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms