RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 GAL3ST1Q99999 423 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 B9D2Q9BPU9 175 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 ALG12Q9BV10 488 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 TAPBPLQ9BX59 468 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 KRTAP1-5Q9BYS1 174 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 ROPN1BQ9BZX4 212 aaPredicted RBP1.81□□□□□ -2.12
CPSF6-207ENST00000551516 NANOGQ9H9S0 305 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 Q9HAA7 133 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 EDA2RQ9HAV5 297 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 NRN1Q9NPD7 142 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 SLC35D1Q9NTN3 355 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 NECAP2Q9NVZ3 263 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 THUMPD1Q9NXG2 353 aaKnown RBP1.81□□□□□ -2.12
CPSF6-207ENST00000551516 CALML5Q9NZT1 146 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 GHRLQ9UBU3 117 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 CYB5R1Q9UHQ9 305 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 VPREB3Q9UKI3 123 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 TMCC3Q9ULS5 477 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 HHLA2Q9UM44 414 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 POFUT2Q9Y2G5 429 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 KLHDC2Q9Y2U9 406 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 MOB4Q9Y3A3 225 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 FBXO7Q9Y3I1 522 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 TIMM10BQ9Y5J6 103 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 KPTNQ9Y664 436 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 USH1CQ9Y6N9 552 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 U3KQV3 271 aa1.81□□□□□ -2.12
CPSF6-207ENST00000551516 DNAH11Q96DT5 4516 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 UBR4Q5T4S7 5183 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 IGKV1D-17A0A075B6S4 117 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 A0A0J9YWU9 116 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 IGHV3-64DA0A0J9YX35 117 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 LCE6AA0A183 80 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 PRSS37A4D1T9 235 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 E9PQ18 207 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 C11orf98E9PRG8 122 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 H0YHG0 523 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 LY6LH3BQJ8 138 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 ARPC3O15145 178 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 POLR3GO15318 223 aaPredicted RBP1.8□□□□□ -2.12
CPSF6-207ENST00000551516 RHBDL1O75783 438 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 OR5F1O95221 314 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 RAB36O95755 333 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF682O95780 498 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 ERCC1P07992 297 aaPredicted RBP1.8□□□□□ -2.12
CPSF6-207ENST00000551516 CD14P08571 375 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 SNRPCP09234 159 aaKnown RBP1.8□□□□□ -2.12
CPSF6-207ENST00000551516 CALCBP10092 127 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 IDO1P14902 403 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 UCP1P25874 307 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 SAA4P35542 130 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 RPL4P36578 427 aaKnown RBP1.8□□□□□ -2.12
CPSF6-207ENST00000551516 TGFBR2P37173 567 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 MDH1P40925 334 aaKnown RBP1.8□□□□□ -2.12
CPSF6-207ENST00000551516 RBM34P42696 430 aaKnown RBP1.8□□□□□ -2.12
CPSF6-207ENST00000551516 CRATP43155 626 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 DYNLT3P51808 116 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 UBE2E1P51965 193 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 ARF6P62330 175 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 MS4A2Q01362 244 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF92Q03936 586 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 PRKCDQ05655 676 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 CKAP4Q07065 602 aaKnown RBP1.8□□□□□ -2.12
CPSF6-207ENST00000551516 KLRD1Q13241 179 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 C1DQ13901 141 aaKnown RBP1.8□□□□□ -2.12
CPSF6-207ENST00000551516 MOGQ16653 247 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 TBC1D28Q2M2D7 210 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 SNAI3Q3KNW1 292 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 ANKRD55Q3KP44 614 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 SLC36A2Q495M3 483 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 CASC10Q5T4H9 136 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 PRAMEF6Q5VXH4 476 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 NANOGP8Q6NSW7 305 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 CGB2Q6NT52 195 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 ATRAIDQ6UW56 229 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 WDR82Q6UXN9 313 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 NUDCD3Q8IVD9 361 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 IFT20Q8IY31 132 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 LRRC18Q8N456 261 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 OR2Z1Q8NG97 314 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 OR6N1Q8NGY5 312 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 OR1F12Q8NHA8 337 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 SLC7A13Q8TCU3 470 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 MYOZ3Q8TDC0 251 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 DLX4Q92988 240 aaPredicted RBP1.8□□□□□ -2.12
CPSF6-207ENST00000551516 ITCHQ96J02 903 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 PPP1R36Q96LQ0 422 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 Q96M85 177 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 GAFA1Q96PS6 74 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 CGREF1Q99674 301 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 ECSITQ9BQ95 431 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 CDCA4Q9BXL8 241 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 OCR1Q9BZK8 76 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 TRIM15Q9C019 465 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 EGLN1Q9GZT9 426 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 OR51B6Q9H340 312 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 RIBC2Q9H4K1 309 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 RANBP3Q9H6Z4 567 aaPredicted RBP1.8□□□□□ -2.12
CPSF6-207ENST00000551516 HEXA-AS1Q9H8Q6 139 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 NMNAT1Q9HAN9 279 aaPredicted RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms