RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 TRAV24A0A0B4J272 114 aa10.14□□□□□ -0.79
PTCH1-221ENST00000550914 TMEM212A6NML5 194 aa10.14□□□□□ -0.79
PTCH1-221ENST00000550914 NUDT19A8MXV4 375 aa10.14□□□□□ -0.79
PTCH1-221ENST00000550914 J3QLW9 94 aa10.14□□□□□ -0.79
PTCH1-221ENST00000550914 RAMP3O60896 148 aa10.14□□□□□ -0.79
PTCH1-221ENST00000550914 ZNF19P17023 458 aa10.14□□□□□ -0.79
PTCH1-221ENST00000550914 RASSF2P50749 326 aa10.14□□□□□ -0.79
PTCH1-221ENST00000550914 DGCR2P98153 550 aa10.14□□□□□ -0.79
PTCH1-221ENST00000550914 ZNF816Q0VGE8 651 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-221ENST00000550914 MRPL28Q13084 256 aaKnown RBP10.14□□□□□ -0.79
PTCH1-221ENST00000550914 ZNF691Q5VV52 312 aa10.14□□□□□ -0.79
PTCH1-221ENST00000550914 RSBN1Q5VWQ0 802 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-221ENST00000550914 SLC35E3Q7Z769 313 aa10.14□□□□□ -0.79
PTCH1-221ENST00000550914 ZNF695Q8IW36 515 aa10.14□□□□□ -0.79
PTCH1-221ENST00000550914 SYS1Q8N2H4 156 aa10.14□□□□□ -0.79
PTCH1-221ENST00000550914 STPG2Q8N412 459 aa10.14□□□□□ -0.79
PTCH1-221ENST00000550914 C4orf36Q96KX1 117 aa10.14□□□□□ -0.79
PTCH1-221ENST00000550914 GON7Q9BXV9 100 aa10.14□□□□□ -0.79
PTCH1-221ENST00000550914 EXOGQ9Y2C4 368 aaKnown RBP10.14□□□□□ -0.79
PTCH1-221ENST00000550914 AP4M1O00189 453 aa10.13□□□□□ -0.79
PTCH1-221ENST00000550914 IGKV1D-33P01593 117 aa10.13□□□□□ -0.79
PTCH1-221ENST00000550914 IGKV1-33P01594 117 aa10.13□□□□□ -0.79
PTCH1-221ENST00000550914 VSIG8P0DPA2 414 aa10.13□□□□□ -0.79
PTCH1-221ENST00000550914 GALEQ14376 348 aa10.13□□□□□ -0.79
PTCH1-221ENST00000550914 C1orf146Q5VVC0 180 aa10.13□□□□□ -0.79
PTCH1-221ENST00000550914 TEX38Q6PEX7 206 aa10.13□□□□□ -0.79
PTCH1-221ENST00000550914 C18orf65Q6ZTR6 163 aa10.13□□□□□ -0.79
PTCH1-221ENST00000550914 TGIF2LXQ8IUE1 241 aa10.13□□□□□ -0.79
PTCH1-221ENST00000550914 IZUMO1Q8IYV9 350 aa10.13□□□□□ -0.79
PTCH1-221ENST00000550914 OR10X1Q8NGY0 326 aa10.13□□□□□ -0.79
PTCH1-221ENST00000550914 IFT22Q9H7X7 185 aa10.13□□□□□ -0.79
PTCH1-221ENST00000550914 ORC6Q9Y5N6 252 aa10.13□□□□□ -0.79
PTCH1-221ENST00000550914 CCRL2O00421 344 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 HSPB6O14558 160 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 HSD17B6O14756 317 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 MAGEB3O15480 346 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 ZFPL1O95159 310 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 IGHV3-7P01780 117 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 GAPDHP04406 335 aaKnown RBP10.12□□□□□ -0.79
PTCH1-221ENST00000550914 ALPLP05186 524 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 CCDC159P0C7I6 412 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 GZMHP20718 246 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 DIAPH2-AS1Q14236 149 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 HNF4GQ14541 408 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 NHLRC3Q5JS37 347 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 ZNF529Q6P280 563 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 ASCL4Q6XD76 172 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 RNF152Q8N8N0 203 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 C8orf31Q8N9H6 132 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 OR52M1Q8NGK5 317 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 OR5AK2Q8NH90 309 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 RFESDQ8TAC1 157 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 MRGPRDQ8TDS7 321 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 LEAP2Q969E1 77 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 LGALS12Q96DT0 336 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 RAX2Q96IS3 184 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 NR1H4Q96RI1 486 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-221ENST00000550914 ALG8Q9BVK2 526 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 ABCG5Q9H222 651 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 LIN7CQ9NUP9 197 aaKnown RBP10.12□□□□□ -0.79
PTCH1-221ENST00000550914 DHDHQ9UQ10 334 aa10.12□□□□□ -0.79
PTCH1-221ENST00000550914 DNAH7Q8WXX0 4024 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 IGHV1-3A0A0C4DH29 117 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 SAC3D1A6NKF1 404 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 CCL24O00175 119 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 MPZL2O60487 215 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 ATP5HO75947 161 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 RAB3AP20336 220 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 SSTR5P35346 364 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 GPR12P47775 334 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 CDX1P47902 265 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-221ENST00000550914 RSU1Q15404 277 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 PNLIPRP3Q17RR3 467 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 KLHL22Q53GT1 634 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 LINC00311Q8N616 119 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 Q8N6K4 173 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 OR2T10Q8NGZ9 312 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 OR8U1Q8NH10 309 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 PLPPR1Q8TBJ4 325 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 TNFAIP8L1Q8WVP5 186 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 EAF1Q96JC9 268 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-221ENST00000550914 DPCDQ9BVM2 203 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-221ENST00000550914 FAM118AQ9NWS6 357 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 IL36GQ9NZH8 169 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 LINC00527Q9UJ94 153 aa10.11□□□□□ -0.79
PTCH1-221ENST00000550914 GABRPO00591 440 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 FADS2O95864 444 aaKnown RBP10.1□□□□□ -0.79
PTCH1-221ENST00000550914 ELANEP08246 267 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 CD1BP29016 333 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 GNG10P50151 68 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 FOXE3Q13461 319 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 KIR2DS1Q14954 304 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 ZSCAN26Q16670 478 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 PIGYQ3MUY2 71 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 Q3ZCU0 254 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 CXorf66Q5JRM2 361 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-221ENST00000550914 C9orf66Q5T8R8 295 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 LINC00596Q86U02 117 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 LHFPL3Q86UP9 236 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 SUMF2Q8NBJ7 301 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms