RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 TENM3Q9P273 2699 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 SMIM26A0A096LP01 95 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 KRBOX1C9JBD0 128 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 F5H5T6 163 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 H0YJW9 148 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 K7ERQ8 282 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 PIN1P1O15428 100 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 FOXH1O75593 365 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 ZNF189O75820 626 aaPredicted RBP2.84□□□□□ -1.95
LIMA1-205ENST00000550592 SCELO95171 688 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 IGLV3-27P01718 113 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 GLAP06280 429 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 HTR1DP28221 377 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 OPRK1P41145 380 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 RANBP1P43487 201 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 KIR3DL2P43630 455 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 RAB7AP51149 207 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 ARPC4P59998 168 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 CRADDP78560 199 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 CDK5Q00535 292 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 IHHQ14623 411 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 CLEC12BQ2HXU8 276 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 C6orf52Q5T4I8 152 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 SAXO2Q658L1 398 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 H3F3CQ6NXT2 135 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 C22orf39Q6P5X5 142 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 SLC13A5Q86YT5 568 aaPredicted RBP2.84□□□□□ -1.95
LIMA1-205ENST00000550592 ZNF547Q8IVP9 402 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 LGI3Q8N145 548 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 C12orf29Q8N999 325 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 GPR26Q8NDV2 337 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 OR5B17Q8NGF7 314 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 OR2Y1Q8NGV0 311 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 DYDC1Q8WWB3 177 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 LZICQ8WZA0 190 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 APH1AQ96BI3 265 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 SGTBQ96EQ0 304 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 AGMATQ9BSE5 352 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 FGF23Q9GZV9 251 aaPredicted RBP2.84□□□□□ -1.95
LIMA1-205ENST00000550592 ZSCAN16Q9H4T2 348 aaPredicted RBP2.84□□□□□ -1.95
LIMA1-205ENST00000550592 UCK1Q9HA47 277 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 FANCEQ9HB96 536 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 SIRT7Q9NRC8 400 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 CHRAC1Q9NRG0 131 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 MCUBQ9NWR8 336 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 PRELID1Q9Y255 219 aa2.84□□□□□ -1.95
LIMA1-205ENST00000550592 CR1P17927 2039 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 HEATR5AQ86XA9 2040 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 GOLGA8IPA6NC78 632 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 ZNF233A6NK53 670 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 GOLGA8JA6NMD2 632 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 OR5K4A6NMS3 321 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 BOLA2-SMG1P6H3BVE0 249 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 UBFD1O14562 309 aaKnown RBP2.83□□□□□ -1.96
LIMA1-205ENST00000550592 POLR3GO15318 223 aaPredicted RBP2.83□□□□□ -1.96
LIMA1-205ENST00000550592 FARS2O95363 451 aaKnown RBP2.83□□□□□ -1.96
LIMA1-205ENST00000550592 APOEP02649 317 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 C1GALT1C1LP0DN25 315 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 TCP1P17987 556 aaKnown RBP2.83□□□□□ -1.96
LIMA1-205ENST00000550592 MSR1P21757 451 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 CD9P21926 228 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 MYL9P24844 172 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 S100A5P33763 92 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 MYCNOSP40205 109 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 PPICP45877 212 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 ATP5J2P56134 94 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 MYL6P60660 151 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 MOBPQ13875 183 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 TFDP2Q14188 446 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 GABRA6Q16445 453 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 C5orf64Q2M2E5 130 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 GOLGA7BQ2TAP0 167 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 ZNF829Q3KNS6 432 aaPredicted RBP2.83□□□□□ -1.96
LIMA1-205ENST00000550592 MRPL21Q7Z2W9 205 aaKnown RBP2.83□□□□□ -1.96
LIMA1-205ENST00000550592 NECAP1Q8NC96 275 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 PROKR2Q8NFJ6 384 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 CIRBP-AS1Q8TBR5 109 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 SERPINB11Q96P15 392 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 IL22Q9GZX6 179 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 NSRP1Q9H0G5 558 aaKnown RBP2.83□□□□□ -1.96
LIMA1-205ENST00000550592 RGCCQ9H4X1 137 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 ZNF442Q9H7R0 627 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 PARVGQ9HBI0 331 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 BATF3Q9NR55 127 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 C8orf17Q9NRJ1 99 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 MED29Q9NX70 200 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 IL20Q9NYY1 176 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 PAIP2BQ9ULR5 123 aaKnown RBP2.83□□□□□ -1.96
LIMA1-205ENST00000550592 OR51B4Q9Y5P0 310 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 PCM1Q15154 2024 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 ALPK2Q86TB3 2170 aa2.83□□□□□ -1.96
LIMA1-205ENST00000550592 C5orf63A6NC05 138 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 SLC22A20A6NK97 555 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 GABRR3A8MPY1 467 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 SERPINE3A8MV23 424 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 TNFRSF11BO00300 401 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 TAAR5O14804 337 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 CHST10O43529 356 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 SLC16A7O60669 478 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 ALOX12BO75342 701 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms