RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 CISD1Q9NZ45 108 aaKnown RBP2.82□□□□□ -1.96
CCNT1-203ENST00000550457 DAPP1Q9UN19 280 aa2.82□□□□□ -1.96
CCNT1-203ENST00000550457 GAB2Q9UQC2 676 aa2.82□□□□□ -1.96
CCNT1-203ENST00000550457 ZFP30Q9Y2G7 519 aa2.82□□□□□ -1.96
CCNT1-203ENST00000550457 KLHDC2Q9Y2U9 406 aa2.82□□□□□ -1.96
CCNT1-203ENST00000550457 UBE2J1Q9Y385 318 aaPredicted RBP2.82□□□□□ -1.96
CCNT1-203ENST00000550457 MMACHCQ9Y4U1 282 aa2.82□□□□□ -1.96
CCNT1-203ENST00000550457 COL4A6Q14031 1691 aa2.82□□□□□ -1.96
CCNT1-203ENST00000550457 PLXNA2O75051 1894 aa2.82□□□□□ -1.96
CCNT1-203ENST00000550457 KIF26AQ9ULI4 1882 aaPredicted RBP2.82□□□□□ -1.96
CCNT1-203ENST00000550457 MDC1Q14676 2089 aaKnown RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 NOTCH3Q9UM47 2321 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 IGKV1D-42A0A075B6H8 117 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 TRAV36DV7A0A075B6V5 113 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 TGIF2-C20orf24A0A0A6YYL0 155 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 TRAV39A0A0B4J263 110 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 A0A0G2JN53 185 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 EDDM13A0A1B0GTR0 161 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 LOC107986453A0A1B0GWG9 222 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 TCRBV21S2A2A0A5A6 115 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 C20orf202A1L168 122 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 PRSS37A4D1T9 235 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 ZNF705GA8MUZ8 300 aaPredicted RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 TMEM250H0YL14 139 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 H0YL77 283 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 NDUFS8O00217 210 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 PLRG1O43660 514 aaKnown RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 CIDEAO60543 219 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 RAMP1O60894 148 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 SRSF10O75494 262 aaKnown RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 TNFSF13O75888 250 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 VENTXO95231 258 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 CSTAP01040 98 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 HLA-DQA2P01906 255 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 OPN1LWP04000 364 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 PGA4P0DJD7 388 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 PGA3P0DJD8 388 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 PGA5P0DJD9 388 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 LIPCP11150 499 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 FGF5P12034 268 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 CD99P14209 185 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 ZNF823P16415 610 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 GNB3P16520 340 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 EGR1P18146 543 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 SERPINA2P20848 420 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 DTYMKP23919 212 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 UCP1P25874 307 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 G0S2P27469 103 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 GRPRP30550 384 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 GNALP38405 381 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 APOBEC1P41238 236 aaKnown RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 ZNF41P51814 821 aaPredicted RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 ZNF133P52736 654 aaPredicted RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 HSD17B7P56937 341 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 BPIFB3P59826 476 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 RPL27P61353 136 aaKnown RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 RPL23AP62750 156 aaKnown RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 VAMP2P63027 116 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 CSNK2A1P68400 391 aaPredicted RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 SP3Q02447 781 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 RPL18Q07020 188 aaKnown RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 UNC119Q13432 240 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 TMEM183BQ1AE95 376 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 PRICKLE4Q2TBC4 344 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 AADACL3Q5VUY0 350 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 C1orf140Q5VVS0 124 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 FBXW9Q5XUX1 488 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 LEMD1Q68G75 181 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 TXNDC8Q6A555 127 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 ASPHD2Q6ICH7 369 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 KCNIP4Q6PIL6 250 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 KLHL24Q6TFL4 600 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 TMPPEQ6ZT21 453 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 H1FNTQ75WM6 255 aaPredicted RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 SSX7Q7RTT5 188 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 NUFIP2Q7Z417 695 aaKnown RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 CACUL1Q86Y37 369 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 FAM219AQ8IW50 185 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 MAML2Q8IZL2 1156 aaPredicted RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 CMTM8Q8IZV2 173 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 GBGT1Q8N5D6 347 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 C2orf73Q8N5S3 287 aaPredicted RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 OR2C3Q8N628 320 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 GVQW1Q8N7I0 195 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 CYB561D1Q8N8Q1 229 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 CCDC71LQ8N9Z2 235 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 NAXEQ8NCW5 288 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 ZNF248Q8NDW4 579 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 CSNK2A3Q8NEV1 391 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 VN1R2Q8NFZ6 395 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 OR5T1Q8NG75 326 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 OR4D6Q8NGJ1 314 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 OR13G1Q8NGZ3 307 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 OR2G3Q8NGZ4 309 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 OR4X1Q8NH49 305 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 OR52N5Q8NH56 324 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 CLDND2Q8NHS1 167 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 NEK7Q8TDX7 302 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 MBD3L1Q8WWY6 194 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms