RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 DUX4L7P0CJ90 424 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 DNASE1P24855 282 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 GIFP27352 417 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 RCVRNP35243 200 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 AP3S2P59780 193 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 PAX5Q02548 391 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 ATXN7L3Q14CW9 347 aaPredicted RBP11.74□□□□□ -0.53
CACNB3-216ENST00000550391 ZNF57Q68EA5 555 aaPredicted RBP11.74□□□□□ -0.53
CACNB3-216ENST00000550391 SLC35E4Q6ICL7 350 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 DUX4L9Q6RFH8 374 aaPredicted RBP11.74□□□□□ -0.53
CACNB3-216ENST00000550391 LYPD2Q6UXB3 125 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 ZNF497Q6ZNH5 498 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 HOGA1Q86XE5 327 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 GAPTQ8N292 157 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 TOMM5Q8N4H5 51 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 SPICQ8N5J4 248 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 FAM216BQ8N7L0 139 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 TMEM185AQ8NFB2 350 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 PLPPR1Q8TBJ4 325 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 ST6GALNAC5Q9BVH7 336 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 DUX4Q9UBX2 424 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 ZNF107Q9UII5 783 aaPredicted RBP11.74□□□□□ -0.53
CACNB3-216ENST00000550391 ANAPC10Q9UM13 185 aa11.74□□□□□ -0.53
CACNB3-216ENST00000550391 FUOMA2VDF0 154 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 NDUFB3O43676 98 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 MT-ND4P03905 459 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 FCGR3AP08637 254 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 CSF1P09603 554 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 SELLP14151 372 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 NAT1P18440 290 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 IFITM3Q01628 133 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 AESQ08117 197 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 SRSF7Q16629 238 aaKnown RBP eCLIP11.73□□□□□ -0.53
CACNB3-216ENST00000550391 LRRC10Q5BKY1 277 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 KRBOX4Q5JUW0 171 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 RSBN1Q5VWQ0 802 aaPredicted RBP11.73□□□□□ -0.53
CACNB3-216ENST00000550391 STEAP3Q658P3 488 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 GDPD3Q7L5L3 318 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 LYSMD2Q8IV50 215 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 GVQW1Q8N7I0 195 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 TMEM229BQ8NBD8 167 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 NINJ1Q92982 152 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 PERPQ96FX8 193 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 COQ2Q96H96 371 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 ING3Q9NXR8 418 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 CTSZQ9UBR2 303 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 MIOXQ9UGB7 285 aa11.73□□□□□ -0.53
CACNB3-216ENST00000550391 ZNF230Q9UIE0 474 aaPredicted RBP11.73□□□□□ -0.53
CACNB3-216ENST00000550391 NSD1Q96L73 2696 aaPredicted RBP11.73□□□□□ -0.53
CACNB3-216ENST00000550391 ANKRD20A5PA0PJZ0 165 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 CEACAM18A8MTB9 384 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 NDUFS8O00217 210 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 ERP29P30040 261 aaKnown RBP11.72□□□□□ -0.53
CACNB3-216ENST00000550391 DSCR9P59020 149 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 DEFA1P59665 94 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 DEFA3P59666 94 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 KLF9Q13886 244 aaPredicted RBP11.72□□□□□ -0.53
CACNB3-216ENST00000550391 ZNF880Q6PDB4 577 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 CLEC2AQ6UVW9 174 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 Q6ZPA2 131 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 LRRC75A-AS1Q8N1F1 130 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 SETD6Q8TBK2 473 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 MRPL30Q8TCC3 161 aaKnown RBP11.72□□□□□ -0.53
CACNB3-216ENST00000550391 MBD6Q96DN6 1003 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 COX4I2Q96KJ9 171 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 NCOR1P1Q9H4R4 102 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 Q9N2K0 584 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 SLC25A10Q9UBX3 287 aaPredicted RBP11.72□□□□□ -0.53
CACNB3-216ENST00000550391 TRAPPC2LQ9UL33 140 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 MGAT4AQ9UM21 535 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 PCDHB10Q9UN67 800 aa11.72□□□□□ -0.53
CACNB3-216ENST00000550391 MEIKINA0A087WXM9 373 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 LINC00854A0A1B0GVQ3 168 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 ZNF736B4DX44 427 aaPredicted RBP11.71□□□□□ -0.53
CACNB3-216ENST00000550391 DVL1O14640 695 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 FCN3O75636 299 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 FCER2P06734 321 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 RPS2P15880 293 aaKnown RBP11.71□□□□□ -0.53
CACNB3-216ENST00000550391 NDUFB7P17568 137 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 GLIPR1P48060 266 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 P2RX3P56373 397 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 TAS2R19P59542 299 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 DYRK1AQ13627 763 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 EDDM3AQ14507 147 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 DEFB113Q30KQ7 82 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 Q6ZS49 121 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 MOB1BQ7L9L4 216 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 NLRC3Q7RTR2 1065 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 BEST4Q8NFU0 473 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 OR8B3Q8NGG8 313 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 OR4K15Q8NH41 348 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 C10orf105Q8TEF2 133 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 CCDC107Q8WV48 283 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 DEDD2Q8WXF8 326 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 FAM168AQ92567 244 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 NEIL1Q96FI4 390 aaPredicted RBP11.71□□□□□ -0.53
CACNB3-216ENST00000550391 OR8B2Q96RD0 313 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 PIMREGQ9BSJ6 248 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 ZNF286AQ9HBT8 521 aa11.71□□□□□ -0.53
CACNB3-216ENST00000550391 KIF25Q9UIL4 384 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms