RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ZNF788Q6ZQV5 615 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 FAM185AQ8N0U4 392 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 TMEM104Q8NE00 496 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 ANGPTL6Q8NI99 470 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 ACOT12Q8WYK0 555 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 NXF2Q9GZY0 626 aaKnown RBP10.96□□□□□ -0.65
NUP188-211ENST00000550219 DNTTIP1Q9H147 329 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 MMP27Q9H306 513 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 KCNK15Q9H427 330 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 SPATA2Q9UM82 520 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 ETV7Q9Y603 341 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 A0A075B6Q4 140 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 SIGLEC5O15389 551 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 HTR3BO95264 441 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 CSTBP04080 98 aaKnown RBP10.95□□□□□ -0.66
NUP188-211ENST00000550219 SERPINA2P20848 420 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 PROK1P58294 105 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 PLA2G7Q13093 441 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 IL13RA2Q14627 380 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 ZNF146Q15072 292 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 SMIM21Q3B7S5 101 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 ATPAF1Q5TC12 328 aaPredicted RBP10.95□□□□□ -0.66
NUP188-211ENST00000550219 OR10K2Q6IF99 312 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 OSR2Q8N2R0 312 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 OR5H6Q8NGV6 325 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 C8orf46Q8TAG6 207 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 LGALS14Q8TCE9 139 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 AP3S1Q92572 193 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 EMG1Q92979 244 aaKnown RBP10.95□□□□□ -0.66
NUP188-211ENST00000550219 MED30Q96HR3 178 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 Q96M66 194 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 TM2D1Q9BX74 207 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 CST11Q9H112 138 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 PPA2Q9H2U2 334 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 RAB22AQ9UL26 194 aa10.95□□□□□ -0.66
NUP188-211ENST00000550219 M0R1W7 72 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 CRTAPO75718 401 aaPredicted RBP10.94□□□□□ -0.66
NUP188-211ENST00000550219 CLPXO76031 633 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 PSG2P11465 335 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 MGMTP16455 207 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 PRKACAP17612 351 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 EFNB2P52799 333 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 RBM11P57052 281 aaKnown RBP10.94□□□□□ -0.66
NUP188-211ENST00000550219 RPS27AP62979 156 aaKnown RBP10.94□□□□□ -0.66
NUP188-211ENST00000550219 CNPY1Q3B7I2 92 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 SPIN3Q5JUX0 258 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 NCR3LG1Q68D85 454 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 BATF2Q8N1L9 274 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 FAM89BQ8N5H3 189 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 ZNRF1Q8ND25 227 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 TNFRSF14Q92956 283 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 CMTM3Q96MX0 182 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 DCUN1D5Q9BTE7 237 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 TMEM59Q9BXS4 323 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 LPAR5Q9H1C0 372 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 BANF2Q9H503 90 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 IFT22Q9H7X7 185 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 METTL8Q9H825 291 aaKnown RBP10.94□□□□□ -0.66
NUP188-211ENST00000550219 IL36RNQ9UBH0 155 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 ZNF222Q9UK12 451 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 A3GALT2U3KPV4 340 aa10.94□□□□□ -0.66
NUP188-211ENST00000550219 IGKV1D-17A0A075B6S4 117 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 FAM90A10PA6NDY2 464 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 FAM90A18PA6NE21 464 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 FAM90A16PA6NEW6 464 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 FAM90A20PA6NIJ5 464 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 FAM90A8PA6NJQ4 464 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 FAM90A7PA6NKC0 464 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 FAM90A22PA8MWA6 464 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 FAM90A12PA8MX19 464 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 FAM90A5PA8MXJ8 464 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 FAM90A23PA8MXZ1 464 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 H3BUX3 64 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 MPIG6BO95866 241 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 FAM90A15PP0C7V4 464 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 FAM90A13PP0C7W8 464 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 FAM90A14PP0C7W9 464 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 FAM90A24PP0C7X0 464 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 LY6EQ16553 131 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 PIGYQ3MUY2 71 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 Q6P435 159 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 MZT2AQ6P582 158 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 LINC00596Q86U02 117 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 C1QL4Q86Z23 238 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 FAM46BQ96A09 425 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 SLC25A38Q96DW6 304 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 SELENOIQ9C0D9 397 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 ABCG5Q9H222 651 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 ST3GAL6Q9Y274 331 aa10.93□□□□□ -0.66
NUP188-211ENST00000550219 PKD1L1Q8TDX9 2849 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 TRRAPQ9Y4A5 3859 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 A0A0A6YYD4 124 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 RFPL4AA6NLU0 287 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 FOXI3A8MTJ6 420 aaPredicted RBP10.92□□□□□ -0.66
NUP188-211ENST00000550219 RFPL4AL1F8VTS6 287 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 GEMIN2O14893 280 aaKnown RBP10.92□□□□□ -0.66
NUP188-211ENST00000550219 LMO1P25800 156 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 PAX6P26367 422 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 PRDX2P32119 198 aa10.92□□□□□ -0.66
NUP188-211ENST00000550219 CEBPDP49716 269 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms