RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 CTDSP2O14595 271 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 CTDSPLO15194 276 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 SPINT2O43291 252 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 ORC5O43913 435 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 PSPNO60542 156 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 DIRAS3O95661 229 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 EIF4EP06730 217 aaKnown RBP8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 LPLP06858 475 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 AMY2BP19961 511 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 ETV6P41212 452 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 DVL1P1P54792 670 aaPredicted RBP8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 TMEM50BP56557 158 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 ACTBP60709 375 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 ACTG1P63261 375 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 IL18Q14116 193 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 EDDM3AQ14507 147 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 ATXN7L3Q14CW9 347 aaPredicted RBP8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 CR1LQ2VPA4 569 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 TMEM249Q2WGJ8 235 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 ZNF260Q3ZCT1 412 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 RSBN1Q5VWQ0 802 aaPredicted RBP8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 CYB5R2Q6BCY4 276 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 SIGIRRQ6IA17 410 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 OR52W1Q6IF63 320 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 CNIH2Q6PI25 160 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 ZNF841Q6ZN19 808 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 C1orf122Q6ZSJ8 110 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 BTN2A1Q7KYR7 527 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 C6orf201Q7Z4U5 140 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 TRAPPC6BQ86SZ2 158 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 LAX1Q8IWV1 398 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 OR4S1Q8NGB4 309 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 OR4M2Q8NGB6 313 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 SULT4A1Q9BR01 284 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 AUNIPQ9H7T9 357 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 IFT46Q9NQC8 304 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 TAS2R8Q9NYW2 309 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 KPTNQ9Y664 436 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 MYO9AB2RTY4 2548 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 YLPM1P49750 1951 aaKnown RBP8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 A0A096LNT2 108 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 IGHV2-70DA0A0C4DH43 119 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 UBE2QL1A1L167 161 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 GABARAPH6UMI1 98 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 NAPSAO96009 420 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 MT-ND4P03905 459 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 CTXN2P0C2S0 81 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 PPIAL4GP0DN37 164 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 GNB3P16520 340 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 TNFSF8P32971 234 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 AESQ08117 197 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 C4orf46Q504U0 113 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 FAM131AQ6UXB0 335 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 Q6ZS49 121 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 FAM185AQ8N0U4 392 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 LILRB2Q8N423 598 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 LY6G5BQ8NDX9 201 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 WFDC11Q8NEX6 87 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 OR4M1Q8NGD0 313 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 OR6Q1Q8NGQ2 317 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 FAM216AQ8WUB2 273 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 FCAMRQ8WWV6 532 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 DEDD2Q8WXF8 326 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 TMEM186Q96B77 213 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 COX4I2Q96KJ9 171 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 ZNF714Q96N38 554 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 FAAP24Q9BTP7 215 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 WDR12Q9GZL7 423 aaKnown RBP8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 MIXL1Q9H2W2 232 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 ZNF286AQ9HBT8 521 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 MBNL3Q9NUK0 354 aaKnown RBP8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 ZNF107Q9UII5 783 aaPredicted RBP8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 AK3Q9UIJ7 227 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 MRPS7Q9Y2R9 242 aaKnown RBP8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 KIAA2026Q5HYC2 2103 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 WNK2Q9Y3S1 2297 aa8.09□□□□□ -1.11
SMARCD1-206ENST00000549274 CR1P17927 2039 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 KIAA1324LA8MWY0 1029 aaPredicted RBP8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 RGS11O94810 467 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 FCGR3AP08637 254 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 GSTT2BP0CG30 244 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 ZNF728P0DKX0 622 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 TBPP20226 339 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 RCVRNP35243 200 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 GLP1RP43220 463 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 AP3S2P59780 193 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 LCN2P80188 198 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 SCGB2A2Q13296 93 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 PDCD1Q15116 288 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 MOGAT2Q3SYC2 334 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 Q3ZCU0 254 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 ACTBL2Q562R1 376 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 PLAC9Q5JTB6 97 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 METTL11BQ5VVY1 283 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 DCAF12L2Q5VW00 463 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 STEAP3Q658P3 488 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 NCR3LG1Q68D85 454 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 ZNF880Q6PDB4 577 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 CCDC190Q86UF4 302 aa8.08□□□□□ -1.12
SMARCD1-206ENST00000549274 BPIFB2Q8N4F0 458 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms