RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 ZNF649Q9BS31 505 aa10.18□□□□□ -0.78
PTCH1-218ENST00000548945 YTHDF1Q9BYJ9 559 aaKnown RBP10.18□□□□□ -0.78
PTCH1-218ENST00000548945 ZCCHC4Q9H5U6 513 aa10.18□□□□□ -0.78
PTCH1-218ENST00000548945 MYRFQ9Y2G1 1151 aa10.18□□□□□ -0.78
PTCH1-218ENST00000548945 A0A1W2PPI3 338 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 DAPL1A0PJW8 107 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 OR4C45A6NMZ5 311 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 SNRNP70P08621 437 aaKnown RBP10.17□□□□□ -0.78
PTCH1-218ENST00000548945 NFYBP25208 207 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 C21orf33P30042 268 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-218ENST00000548945 MTNR1BP49286 362 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 RAB7AP51149 207 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 GP2P55259 537 aaKnown RBP10.17□□□□□ -0.78
PTCH1-218ENST00000548945 SLC35B1P78383 322 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 MADCAM1Q13477 382 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 ATXN7L3Q14CW9 347 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-218ENST00000548945 ELP2Q6IA86 826 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 UNQ9370/PRO34162Q6UXP9 181 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 C5orf56Q8N8D9 126 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 OR10A7Q8NGE5 316 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 OR51A4Q8NGJ6 313 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 OR5D18Q8NGL1 313 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 OR10AC1Q8NH08 325 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 OR56B4Q8NH76 319 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 HAVCR2Q8TDQ0 301 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 MRPL48Q96GC5 212 aaKnown RBP10.17□□□□□ -0.78
PTCH1-218ENST00000548945 P2RX4Q99571 388 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 PPIL3Q9H2H8 161 aaKnown RBP10.17□□□□□ -0.78
PTCH1-218ENST00000548945 CALYQ9NYX4 217 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 BLOC1S6Q9UL45 172 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 SORL1Q92673 2214 aa10.17□□□□□ -0.78
PTCH1-218ENST00000548945 IL1AP01583 271 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 IGHG2P01859 326 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 TMEM225BP0DP42 221 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 TMEM11P17152 192 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 GLP1RP43220 463 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 KCNJ3P48549 501 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 ZP1P60852 638 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 SNRPGP62308 76 aaKnown RBP10.16□□□□□ -0.78
PTCH1-218ENST00000548945 ALKBH1Q13686 389 aaKnown RBP10.16□□□□□ -0.78
PTCH1-218ENST00000548945 KISS1Q15726 138 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 KCTD21Q4G0X4 260 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 RBM48Q5RL73 367 aaKnown RBP10.16□□□□□ -0.78
PTCH1-218ENST00000548945 C6orf141Q5SZD1 244 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 MEDAGQ5VYS4 303 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 RNF144BQ7Z419 303 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 ZNF329Q86UD4 541 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 PARP16Q8N5Y8 322 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 DRAM1Q8N682 238 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 ACBD7Q8N6N7 88 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 PXT1Q8NFP0 134 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 OR5D14Q8NGL3 314 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 RHOXF1Q8NHV9 184 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 RNFT2Q96EX2 444 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 PELI1Q96FA3 418 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 CPNE2Q96FN4 548 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-218ENST00000548945 BARHL1Q9BZE3 327 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 IDI2-AS1Q9NZ38 188 aa10.16□□□□□ -0.78
PTCH1-218ENST00000548945 MEIKINA0A087WXM9 373 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 SNTNA6NMZ2 147 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 SERPINE3A8MV23 424 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 NPIPB11E5RHQ5 1161 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 SULT1B1O43704 296 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 HCKP08631 526 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 CCDC159P0C7I6 412 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 NHLRC4P0CG21 123 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-218ENST00000548945 EBI3Q14213 229 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 HES1Q14469 280 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 IL13RA2Q14627 380 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 PAN3Q58A45 887 aaKnown RBP10.15□□□□□ -0.78
PTCH1-218ENST00000548945 UTF1Q5T230 341 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 C8orf86Q6ZUL3 223 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 SERPINA12Q8IW75 414 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 FOXRED2Q8IWF2 684 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 KLHL30-AS1Q8NEE0 82 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 Q8NFD4 153 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 OR13A1Q8NGR1 328 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 CNIH3Q8TBE1 160 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 NOL4LQ96MY1 436 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-218ENST00000548945 ING3Q9NXR8 418 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 SCOCQ9UIL1 159 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 KIF25Q9UIL4 384 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 PSG11Q9UQ72 335 aa10.15□□□□□ -0.78
PTCH1-218ENST00000548945 TRAV24A0A0B4J272 114 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 TMEM212A6NML5 194 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 NUDT19A8MXV4 375 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 J3QLW9 94 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 RAMP3O60896 148 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 WBP4O75554 376 aaKnown RBP10.14□□□□□ -0.79
PTCH1-218ENST00000548945 ZNF19P17023 458 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 GABRB1P18505 474 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 GABARAPL2P60520 117 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 DGCR2P98153 550 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 ZNF816Q0VGE8 651 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-218ENST00000548945 MRPL28Q13084 256 aaKnown RBP10.14□□□□□ -0.79
PTCH1-218ENST00000548945 RSBN1Q5VWQ0 802 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-218ENST00000548945 SLC35E3Q7Z769 313 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 ZNF695Q8IW36 515 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 SYS1Q8N2H4 156 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 STPG2Q8N412 459 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms